q2-sample-classifier: machine-learning tools for microbiome classification and regression

Nicholas A. Bokulich; Matthew R. Dillon; Evan Bolyen; Benjamin D. Kaehler; Gavin A. Huttley; J. Gregory Caporaso

doi:10.21105/JOSS.00934

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Nicholas A. Bokulich
, Matthew R. Dillon
, Evan Bolyen
, Benjamin D. Kaehler
, Gavin A. Huttley
, J. Gregory Caporaso

Informatics, Computing, and Cyber Systems, School of

Research output: Contribution to journal › Article › peer-review

143 Scopus citations

Abstract

q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.

Original language	English (US)
Article number	934
Journal	Journal of Open Research Software
Volume	3
Issue number	30
DOIs	https://doi.org/10.21105/JOSS.00934
State	Published - 2018

ASJC Scopus subject areas

Software
Information Systems
Library and Information Sciences

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10.21105/JOSS.00934

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title = "q2-sample-classifier: machine-learning tools for microbiome classification and regression",

abstract = "q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.",

author = "Bokulich, \{Nicholas A.\} and Dillon, \{Matthew R.\} and Evan Bolyen and Kaehler, \{Benjamin D.\} and Huttley, \{Gavin A.\} and Caporaso, \{J. Gregory\}",

year = "2018",

doi = "10.21105/JOSS.00934",

language = "English (US)",

volume = "3",

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T2 - machine-learning tools for microbiome classification and regression

AU - Bokulich, Nicholas A.

AU - Dillon, Matthew R.

AU - Bolyen, Evan

AU - Kaehler, Benjamin D.

AU - Huttley, Gavin A.

AU - Caporaso, J. Gregory

PY - 2018

Y1 - 2018

N2 - q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.

AB - q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.

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UR - https://www.scopus.com/pages/publications/85062293901#tab=citedBy

U2 - 10.21105/JOSS.00934

DO - 10.21105/JOSS.00934

M3 - Article

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JO - Journal of Open Research Software

JF - Journal of Open Research Software

IS - 30

M1 - 934

ER -

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Abstract

ASJC Scopus subject areas

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