q2-sample-classifier: machine-learning tools for microbiome classification and regression

Nicholas A. Bokulich; Matthew R. Dillon; Evan Bolyen; Benjamin D. Kaehler; Gavin A. Huttley; J. Gregory Caporaso

doi:10.21105/JOSS.00934

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Nicholas A. Bokulich, Matthew R. Dillon, Evan Bolyen, Benjamin D. Kaehler, Gavin A. Huttley, J. Gregory Caporaso

Informatics, Computing, and Cyber Systems, School of

Research output: Contribution to journal › Article › peer-review

135 Scopus citations

Abstract

q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.

Original language	English (US)
Article number	934
Journal	Journal of Open Research Software
Volume	3
Issue number	30
DOIs	https://doi.org/10.21105/JOSS.00934
State	Published - 2018

ASJC Scopus subject areas

Software
Information Systems
Library and Information Sciences

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10.21105/JOSS.00934

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title = "q2-sample-classifier: machine-learning tools for microbiome classification and regression",

abstract = "q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.",

author = "Bokulich, \{Nicholas A.\} and Dillon, \{Matthew R.\} and Evan Bolyen and Kaehler, \{Benjamin D.\} and Huttley, \{Gavin A.\} and Caporaso, \{J. Gregory\}",

year = "2018",

doi = "10.21105/JOSS.00934",

language = "English (US)",

volume = "3",

journal = "Journal of Open Research Software",

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T2 - machine-learning tools for microbiome classification and regression

AU - Bokulich, Nicholas A.

AU - Dillon, Matthew R.

AU - Bolyen, Evan

AU - Kaehler, Benjamin D.

AU - Huttley, Gavin A.

AU - Caporaso, J. Gregory

PY - 2018

Y1 - 2018

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AB - q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad audience of non-bioinformatics specialists.

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DO - 10.21105/JOSS.00934

M3 - Article

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JO - Journal of Open Research Software

JF - Journal of Open Research Software

IS - 30

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ER -

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Abstract

ASJC Scopus subject areas

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