@article{141d8feeaa5e4587bbf9a0676043fb92,
title = "Protocol for Projecting Allele Frequency Change under Future Climate Change at Adaptive-Associated Loci",
abstract = "We describe how to predict population-level allele frequency change at loci associated with locally adapted traits under future climate conditions. Our method can identify populations that are at higher risk of local extinction and those that might be prime targets for conservation intervention. We draw on previously developed community ecology statistical methods and apply them in novel ways to plant genomes. While a powerful diagnostic tool, our method requires a wealth of genomic data for use. For complete details on the use and execution of this protocol, please refer to Blumstein et al. (2020).",
author = "Meghan Blumstein and Andrew Richardson and David Weston and Jin Zhang and Wellington Muchero and Robin Hopkins",
note = "Funding Information: This material is based on work supported by the U.S. Department of Energy , Office of Science, Office of Workforce Development for Teachers and Scientists, Office of Science Graduate Student Research (SCGSR) program, and by the National Science Foundation Graduate Research Fellowship under grant no. DGE1745303 . The SCGSR program is administered by the Oak Ridge Institute for Science and Education (ORISE) for the DOE. ORISE is managed by ORAU under contract number DE-SC0014664. Funding Information: This material is based on work supported by the U.S. Department of Energy, Office of Science, Office of Workforce Development for Teachers and Scientists, Office of Science Graduate Student Research (SCGSR) program, and by the National Science Foundation Graduate Research Fellowship under grant no. DGE1745303. The SCGSR program is administered by the Oak Ridge Institute for Science and Education (ORISE) for the DOE. ORISE is managed by ORAU under contract number DE-SC0014664. M.B. and R.H. developed statistical protocols. D.W. J.Z. and W.M. provided genomic information and loci of interest GWAS results. A.R. helped design trait sampling, used to produce actual and example data. The authors declare no competing interests. Publisher Copyright: {\textcopyright} 2020 The Author(s)",
year = "2020",
month = sep,
day = "18",
doi = "10.1016/j.xpro.2020.100061",
language = "English (US)",
volume = "1",
journal = "STAR Protocols",
issn = "2666-1667",
publisher = "Cell Press",
number = "2",
}