Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Peter F. Chuckran; Marcel Huntemann; Alicia Clum; Brian Foster; Bryce Foster; Simon Roux; Krishnaveni Palaniappan; Neha Varghese; Supratim Mukherjee; T. B.K. Reddy; Chris Daum; Alex Copeland; Natalia N. Ivanova; Nikos C. Kyrpides; Tijana Glavina del Rio; Emiley A. Eloe-Fadrosh; Ember M. Morrissey; Egbert Schwartz; Viacheslav Fofanov; Bruce Hungate; Paul Dijkstra

doi:10.1128/MRA.00895-20

Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Peter F. Chuckran
, Marcel Huntemann
, Alicia Clum
, Brian Foster
, Bryce Foster
, Simon Roux
, Krishnaveni Palaniappan
, Neha Varghese
, Supratim Mukherjee
, T. B.K. Reddy
, Chris Daum
, Alex Copeland
, Natalia N. Ivanova
, Nikos C. Kyrpides
, Tijana Glavina del Rio
, Emiley A. Eloe-Fadrosh
, Ember M. Morrissey
, Egbert Schwartz
, Viacheslav Fofanov
, Bruce Hungate

Paul Dijkstra

Biological Sciences

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.

Original language	English (US)
Article number	e00895-20
Journal	Microbiology Resource Announcements
Volume	9
Issue number	44
DOIs	https://doi.org/10.1128/MRA.00895-20
State	Published - Oct 29 2020

ASJC Scopus subject areas

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

Access to Document

10.1128/MRA.00895-20

Cite this

Chuckran, P. F., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., del Rio, T. G., Eloe-Fadrosh, E. A., Morrissey, E. M., Schwartz, E., Fofanov, V., ... Dijkstra, P. (2020). Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil. Microbiology Resource Announcements, 9(44), Article e00895-20. https://doi.org/10.1128/MRA.00895-20

Chuckran, PF, Huntemann, M, Clum, A, Foster, B, Foster, B, Roux, S, Palaniappan, K, Varghese, N, Mukherjee, S, Reddy, TBK, Daum, C, Copeland, A, Ivanova, NN, Kyrpides, NC, del Rio, TG, Eloe-Fadrosh, EA, Morrissey, EM, Schwartz, E, Fofanov, V, Hungate, B & Dijkstra, P 2020, 'Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil', Microbiology Resource Announcements, vol. 9, no. 44, e00895-20. https://doi.org/10.1128/MRA.00895-20

@article{998608117782494fb263fd383b0b7ab7,

title = "Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil",

abstract = "The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.",

author = "Chuckran, \{Peter F.\} and Marcel Huntemann and Alicia Clum and Brian Foster and Bryce Foster and Simon Roux and Krishnaveni Palaniappan and Neha Varghese and Supratim Mukherjee and Reddy, \{T. B.K.\} and Chris Daum and Alex Copeland and Ivanova, \{Natalia N.\} and Kyrpides, \{Nikos C.\} and \{del Rio\}, \{Tijana Glavina\} and Eloe-Fadrosh, \{Emiley A.\} and Morrissey, \{Ember M.\} and Egbert Schwartz and Viacheslav Fofanov and Bruce Hungate and Paul Dijkstra",

year = "2020",

month = oct,

day = "29",

doi = "10.1128/MRA.00895-20",

language = "English (US)",

volume = "9",

journal = "Microbiology Resource Announcements",

issn = "2169-8287",

publisher = "American Society for Microbiology",

number = "44",

}

TY - JOUR

T1 - Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

AU - Chuckran, Peter F.

AU - Huntemann, Marcel

AU - Clum, Alicia

AU - Foster, Brian

AU - Foster, Bryce

AU - Roux, Simon

AU - Palaniappan, Krishnaveni

AU - Varghese, Neha

AU - Mukherjee, Supratim

AU - Reddy, T. B.K.

AU - Daum, Chris

AU - Copeland, Alex

AU - Ivanova, Natalia N.

AU - Kyrpides, Nikos C.

AU - del Rio, Tijana Glavina

AU - Eloe-Fadrosh, Emiley A.

AU - Morrissey, Ember M.

AU - Schwartz, Egbert

AU - Fofanov, Viacheslav

AU - Hungate, Bruce

AU - Dijkstra, Paul

PY - 2020/10/29

Y1 - 2020/10/29

N2 - The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.

AB - The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.

UR - https://www.scopus.com/pages/publications/85095883238

UR - https://www.scopus.com/pages/publications/85095883238#tab=citedBy

U2 - 10.1128/MRA.00895-20

DO - 10.1128/MRA.00895-20

M3 - Article

AN - SCOPUS:85095883238

SN - 2169-8287

VL - 9

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

IS - 44

M1 - e00895-20

ER -

Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Abstract

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this