Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Peter F. Chuckran; Marcel Huntemann; Alicia Clum; Brian Foster; Bryce Foster; Simon Roux; Krishnaveni Palaniappan; Neha Varghese; Supratim Mukherjee; T. B.K. Reddy; Chris Daum; Alex Copeland; Natalia N. Ivanova; Nikos C. Kyrpides; Tijana Glavina del Rio; Emiley A. Eloe-Fadrosh; Ember M. Morrissey; Egbert Schwartz; Viacheslav Fofanov; Bruce Hungate; Paul Dijkstra

doi:10.1128/MRA.00895-20

Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Peter F. Chuckran, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Neha Varghese, Supratim Mukherjee, T. B.K. Reddy, Chris Daum, Alex Copeland, Natalia N. Ivanova, Nikos C. Kyrpides, Tijana Glavina del Rio, Emiley A. Eloe-Fadrosh, Ember M. Morrissey, Egbert Schwartz, Viacheslav Fofanov, Bruce HungatePaul Dijkstra

Biological Sciences

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Abstract

The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.

Original language	English (US)
Article number	e00895-20
Journal	Microbiology Resource Announcements
Volume	9
Issue number	44
DOIs	https://doi.org/10.1128/MRA.00895-20
State	Published - Oct 29 2020

ASJC Scopus subject areas

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

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Chuckran, P. F., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., del Rio, T. G., Eloe-Fadrosh, E. A., Morrissey, E. M., Schwartz, E., Fofanov, V., ... Dijkstra, P. (2020). Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil. Microbiology Resource Announcements, 9(44), Article e00895-20. https://doi.org/10.1128/MRA.00895-20

Chuckran, PF, Huntemann, M, Clum, A, Foster, B, Foster, B, Roux, S, Palaniappan, K, Varghese, N, Mukherjee, S, Reddy, TBK, Daum, C, Copeland, A, Ivanova, NN, Kyrpides, NC, del Rio, TG, Eloe-Fadrosh, EA, Morrissey, EM, Schwartz, E, Fofanov, V, Hungate, B & Dijkstra, P 2020, 'Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil', Microbiology Resource Announcements, vol. 9, no. 44, e00895-20. https://doi.org/10.1128/MRA.00895-20

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abstract = "The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.",

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AU - Foster, Bryce

AU - Roux, Simon

AU - Palaniappan, Krishnaveni

AU - Varghese, Neha

AU - Mukherjee, Supratim

AU - Reddy, T. B.K.

AU - Daum, Chris

AU - Copeland, Alex

AU - Ivanova, Natalia N.

AU - Kyrpides, Nikos C.

AU - del Rio, Tijana Glavina

AU - Eloe-Fadrosh, Emiley A.

AU - Morrissey, Ember M.

AU - Schwartz, Egbert

AU - Fofanov, Viacheslav

AU - Hungate, Bruce

AU - Dijkstra, Paul

PY - 2020/10/29

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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

Abstract

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