TY - JOUR
T1 - Explicitly representing soil microbial processes in Earth system models
AU - Wieder, William R.
AU - Allison, Steven D.
AU - Davidson, Eric A.
AU - Georgiou, Katerina
AU - Hararuk, Oleksandra
AU - He, Yujie
AU - Hopkins, Francesca
AU - Luo, Yiqi
AU - Smith, Matthew J.
AU - Sulman, Benjamin
AU - Todd-Brown, Katherine
AU - Wang, Ying Ping
AU - Xia, Jianyang
AU - Xu, Xiaofeng
N1 - Publisher Copyright:
©2015. American Geophysical Union. All Rights Reserved.
PY - 2015/10/1
Y1 - 2015/10/1
N2 - Microbes influence soil organic matter decomposition and the long-term stabilization of carbon (C) in soils. We contend that by revising the representation of microbial processes and their interactions with the physicochemical soil environment, Earth system models (ESMs) will make more realistic global C cycle projections. Explicit representation of microbial processes presents considerable challenges due to the scale at which these processes occur. Thus, applying microbial theory in ESMs requires a framework to link micro-scale process-level understanding and measurements to macro-scale models used to make decadal- to century-long projections. Here we review the diversity, advantages, and pitfalls of simulating soil biogeochemical cycles using microbial-explicit modeling approaches. We present a roadmap for how to begin building, applying, and evaluating reliable microbial-explicit model formulations that can be applied in ESMs. Drawing from experience with traditional decomposition models, we suggest the following: (1) guidelines for common model parameters and output that can facilitate future model intercomparisons; (2) development of benchmarking and model-data integration frameworks that can be used to effectively guide, inform, and evaluate model parameterizations with data from well-curated repositories; and (3) the application of scaling methods to integrate microbial-explicit soil biogeochemistry modules within ESMs. With contributions across scientific disciplines, we feel this roadmap can advance our fundamental understanding of soil biogeochemical dynamics and more realistically project likely soil C response to environmental change at global scales.
AB - Microbes influence soil organic matter decomposition and the long-term stabilization of carbon (C) in soils. We contend that by revising the representation of microbial processes and their interactions with the physicochemical soil environment, Earth system models (ESMs) will make more realistic global C cycle projections. Explicit representation of microbial processes presents considerable challenges due to the scale at which these processes occur. Thus, applying microbial theory in ESMs requires a framework to link micro-scale process-level understanding and measurements to macro-scale models used to make decadal- to century-long projections. Here we review the diversity, advantages, and pitfalls of simulating soil biogeochemical cycles using microbial-explicit modeling approaches. We present a roadmap for how to begin building, applying, and evaluating reliable microbial-explicit model formulations that can be applied in ESMs. Drawing from experience with traditional decomposition models, we suggest the following: (1) guidelines for common model parameters and output that can facilitate future model intercomparisons; (2) development of benchmarking and model-data integration frameworks that can be used to effectively guide, inform, and evaluate model parameterizations with data from well-curated repositories; and (3) the application of scaling methods to integrate microbial-explicit soil biogeochemistry modules within ESMs. With contributions across scientific disciplines, we feel this roadmap can advance our fundamental understanding of soil biogeochemical dynamics and more realistically project likely soil C response to environmental change at global scales.
KW - Earth system modeling
KW - biogeochemical cycles, processes, and modeling
KW - carbon cycling
KW - microbe/mineral interactions
KW - soils/pedology
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U2 - 10.1002/2015GB005188
DO - 10.1002/2015GB005188
M3 - Article
AN - SCOPUS:84946543320
SN - 0886-6236
VL - 29
SP - 1782
EP - 1800
JO - Global Biogeochemical Cycles
JF - Global Biogeochemical Cycles
IS - 10
ER -