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• 2022

  Genetic divergence along a climate gradient shapes chemical plasticity of a foundation tree species to both changing climate and herbivore damage

  Eisenring, M., Best, R. J., Zierden, M. R., Cooper, H. F., Norstrem, M. A., Whitham, T. G., Grady, K., Allan, G. J. & Lindroth, R. L., Aug 2022, In: Global change biology. 28, 15, p. 4684-4700 17 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia

  De La Torre, A. R., Sekhwal, M. K., Puiu, D., Salzberg, S. L., Scott, A. D., Allen, B., Neale, D. B., Chin, A. R. O. & Buckley, T. N., Jan 2022, In: Plant Journal. 109, 1, p. 7-22 16 p.

  Research output: Contribution to journal › Article › peer-review
  7 Scopus citations

• Genomic characterization of Francisella tularensis and other diverse Francisella species from complex samples

  Wagner, D. M., Birdsell, D. N., McDonough, R. F., Nottingham, R., Kocos, K., Celona, K., Özsürekci, Y., Öhrman, C., Karlsson, L., Myrtennäs, K., Sjödin, A., Johansson, A., Keim, P. S., Forsman, M. & Sahl, J. W., Oct 2022, In: PLoS ONE. 17, 10 October, e0273273.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Genomic Characterization of Parengyodontium torokii sp. nov., a Biofilm-Forming Fungus Isolated from Mars 2020 Assembly Facility

  Parker, C. W., Teixeira, M. D. M., Singh, N. K., Raja, H. A., Cank, K. B., Spigolon, G., Oberlies, N. H., Barker, B. M., Stajich, J. E., Mason, C. E. & Venkateswaran, K., Jan 2022, In: Journal of Fungi. 8, 1, 66.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Genotypic confirmation of a biased phenotypic sex ratio in a dryland moss using restriction fragment length polymorphisms

  Ekwealor, J. T. B., Benjamin, S. D., Jomsky, J. Z., Bowker, M. A., Stark, L. R., McLetchie, D. N., Mishler, B. D. & Fisher, K. M., Mar 1 2022, In: Applications in Plant Sciences. 10, 2, e11467.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Geologic and geodetic constraints on the magnitude and frequency of earthquakes along Malawi's active faults: the Malawi Seismogenic Source Model (MSSM)

  Williams, J. N., Wedmore, L. N. J., Fagereng, Å., Werner, M. J., Mdala, H., Shillington, D. J., Scholz, C. A., Kolawole, F., Wright, L. J. M., Biggs, J., Dulanya, Z., Mphepo, F. & Chindandali, P., Nov 7 2022, In: Natural Hazards and Earth System Sciences. 22, 11, p. 3607-3639 33 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Georeferencing oblique PhenoCam imagery

  Kaddoura, Y. O., Wilkinson, B., Merrick, T., Barnes, G., Duffy, K., Broadbent, E., Abd-Elrahman, A., Binford, M. & Richardson, A. D., Aug 2022, In: ISPRS Journal of Photogrammetry and Remote Sensing. 190, p. 301-321 21 p.

  Research output: Contribution to journal › Article › peer-review

• Geospatial Analysis of Nonmarket Values to Prioritize Forest Restoration

  Soder, A. B., Mueller, J. M., Springer, A. E. & LaPine, K. E., Sep 2022, In: Land. 11, 9, 1387.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Global geologic map of asteroid (101955) Bennu indicates heterogeneous resurfacing in the past 500,000 years

  Jawin, E. R., McCoy, T. J., Walsh, K. J., Connolly, H. C., Ballouz, R. L., Ryan, A. J., Kaplan, H. H., Pajola, M., Hamilton, V. E., Barnouin, O. S., Emery, J. P., Rozitis, B., DellaGiustina, D. N., Daly, M. G., Bennett, C. A., Golish, D. R., Perry, M. E., Daly, R. T., Bierhaus, E. B., Nolan, M. C., & 2 othersEnos, H. L. & Lauretta, D. S., Jul 15 2022, In: Icarus. 381, 114992.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  5 Scopus citations

• Globally, tree fecundity exceeds productivity gradients

  Journé, V., Andrus, R., Aravena, M. C., Ascoli, D., Berretti, R., Berveiller, D., Bogdziewicz, M., Boivin, T., Bonal, R., Caignard, T., Calama, R., Camarero, J. J., Chang-Yang, C. H., Courbaud, B., Courbet, F., Curt, T., Das, A. J., Daskalakou, E., Davi, H., Delpierre, N., & 74 othersDelzon, S., Dietze, M., Donoso Calderon, S., Dormont, L., Maria Espelta, J., Fahey, T. J., Farfan-Rios, W., Gehring, C. A., Gilbert, G. S., Gratzer, G., Greenberg, C. H., Guo, Q., Hacket-Pain, A., Hampe, A., Han, Q., Lambers, J. H. R., Hoshizaki, K., Ibanez, I., Johnstone, J. F., Kabeya, D., Kays, R., Kitzberger, T., Knops, J. M. H., Kobe, R. K., Kunstler, G., Lageard, J. G. A., LaMontagne, J. M., Leininger, T., Limousin, J. M., Lutz, J. A., Macias, D., McIntire, E. J. B., Moore, C. M., Moran, E., Motta, R., Myers, J. A., Nagel, T. A., Noguchi, K., Ourcival, J. M., Parmenter, R., Pearse, I. S., Perez-Ramos, I. M., Piechnik, L., Poulsen, J., Poulton-Kamakura, R., Qiu, T., Redmond, M. D., Reid, C. D., Rodman, K. C., Rodriguez-Sanchez, F., Sanguinetti, J. D., Scher, C. L., Marle, H. S. V., Seget, B., Sharma, S., Silman, M., Steele, M. A., Stephenson, N. L., Straub, J. N., Swenson, J. J., Swift, M., Thomas, P. A., Uriarte, M., Vacchiano, G., Veblen, T. T., Whipple, A. V., Whitham, T. G., Wright, B., Wright, S. J., Zhu, K., Zimmerman, J. K., Zlotin, R., Zywiec, M. & Clark, J. S., Jun 2022, In: Ecology Letters. 25, 6, p. 1471-1482 12 p.

  Research output: Contribution to journal › Letter › peer-review

• Global Perspectives on English Teachers' Attitudes and Perceptions of World Englishes in TESOL Classrooms

  Dalman, M., Yaw, K. & Kang, O., 2022, (Accepted/In press) In: TESOL Quarterly.

  Research output: Contribution to journal › Article › peer-review

• GPU-enabled searches for periodic signals of unknown shape

  Gowanlock, M., Butler, N. R., Trilling, D. E. & McNeill, A., Jan 2022, In: Astronomy and Computing. 38, 100511.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Graph Embedding: A Methodological Survey

  Barr, J. R., Shaw, P., Abu-Khzam, F. N., Thatcher, T. & Hocking, T. D., 2022, Proceedings - 2022 4th International Conference on Transdisciplinary AI, TransAI 2022. Institute of Electrical and Electronics Engineers Inc., p. 142-148 7 p. (Proceedings - 2022 4th International Conference on Transdisciplinary AI, TransAI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Graph r-hued colorings—A survey

  Chen, Y., Fan, S., Lai, H. J. & Xu, M., Nov 15 2022, In: Discrete Applied Mathematics. 321, p. 24-48 25 p.

  Research output: Contribution to journal › Review article › peer-review
  1 Scopus citations

• Gravitropically Stabilized Self-Assembly of Active Microcrystallites and Spinning Free Janus Particles

  Nabavizadeh, S. A., Castañeda, J., Gibbs, J. G. & Nourhani, A., Jan 2022, In: Particle and Particle Systems Characterization. 39, 1, 2100232.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Greenhouse gas emissions from global cities under SSP/RCP scenarios, 1990 to 2100

  Gurney, K. R., Kılkış, Ş., Seto, K. C., Lwasa, S., Moran, D., Riahi, K., Keller, M., Rayner, P. & Luqman, M., Mar 2022, In: Global Environmental Change. 73, 102478.

  Research output: Contribution to journal › Article › peer-review
  9 Scopus citations

• Green innovation and environmental misconduct

  Rayfield, B. & Unsal, O., Jul 7 2022, In: Managerial Finance. 48, 8, p. 1156-1173 18 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Gross primary production (GPP) and red solar induced fluorescence (SIF) respond differently to light and seasonal environmental conditions in a subalpine conifer forest

  Yang, J. C., Magney, T. S., Albert, L. P., Richardson, A. D., Frankenberg, C., Stutz, J., Grossmann, K., Burns, S. P., Seyednasrollah, B., Blanken, P. D. & Bowling, D. R., Apr 15 2022, In: Agricultural and Forest Meteorology. 317, 108904.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• Guidelines for Developing Bots for GitHub

  Wessel, M., Zaidman, A., Gerosa, M. A. & Steinmacher, I., 2022, (Accepted/In press) In: IEEE Software. p. 1-8 8 p.

  Research output: Contribution to journal › Article › peer-review

• Guiding Emergency Treatment With Extended Focused Assessment With Sonography in Trauma by Emergency Responders (GET eFASTER)

  Shaw, M. R., Godzdanker, I., Hawbaker, N. & McManis, B. G., 2022, (Accepted/In press) In: Air Medical Journal.

  Research output: Contribution to journal › Article › peer-review

• Guiding the Prostatic Artery Embolization Procedure With Computational Fluid Dynamics

  Mahmoudi, M., Jennings, C., Pereira, K., Hall, A. F. & Arzani, A., Nov 1 2022, In: Journal of Biomechanical Engineering. 144, 11, 111004 EN.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Habitat Type Affects Elevational Patterns in Ground-dwelling Arthropod Communities

  Uhey, D. A., Bowker, M. A., Haubensak, K. A., Auty, D., Vissa, S. & Hofstetter, R. W., Jul 1 2022, In: Journal of Insect Science. 22, 4, 9.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Hardware Implementation for Analog Key Encapsulation Based on ReRAM PUF

  Rios, M. A., Assiri, S. & Cambou, B., 2022, Intelligent Computing - Proceedings of the 2022 Computing Conference. Arai, K. (ed.). Springer Science and Business Media Deutschland GmbH, p. 825-836 12 p. (Lecture Notes in Networks and Systems; vol. 508 LNNS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Hash Based Encryption Schemes Using Physically Unclonable Functions

  Miandaob, D. G., Booher, D., Cambou, B. & Assiri, S., 2022, Intelligent Computing - Proceedings of the 2022 Computing Conference. Arai, K. (ed.). Springer Science and Business Media Deutschland GmbH, p. 602-616 15 p. (Lecture Notes in Networks and Systems; vol. 508 LNNS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Hawaiian hoary bat responses to habitat, season, and non-native insectivore suppression

  Moseley, R. D., Shiels, A. B., Aue, A., Haines, W. P., Aslan, C. E. & Liang, C. T., 2022, (Accepted/In press) In: Journal of Wildlife Management.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Healthcare utilization and costs among high-need and frail Mexican American Medicare beneficiaries

  Rivera-Hernandez, M., Kumar, A., Chou, L. N., Keeney, T., Ferdows, N., Karmarkar, A., Markides, K. S. & Ottenbacher, K., Jan 2022, In: PLoS ONE. 17, 1 January 2022, e0262079.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Health Correlates of Intimate Partner Violence and Help-seeking Among Unauthorized Immigrant Women

  Shuman, S., Pollitt, A. M., O’Brien, M., Ibrahim, J. & Gupta, J., Sep 2022, In: Journal of Interpersonal Violence.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Helicobacter pylori Prevalence and Risk Factors in Three Rural Indigenous Communities of Northern Arizona

  Harris, R. B., Brown, H. E., Begay, R. L., Sanderson, P. R., Chief, C., Monroy, F. P. & Oren, E., Jan 1 2022, In: International Journal of Environmental Research and Public Health. 19, 2, 797.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Helper Data Masking for Physically Unclonable Function-Based Key Generation Algorithms

  Ali Pour, A., Afghah, F., Hely, D., Beroulle, V., Natale, G. D., Korenda, A. R. & Cambou, B., 2022, In: IEEE Access. 10, p. 40150-40164 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• High Latitude Modulation of the Holocene North American Monsoon

  Routson, C. C., Erb, M. P. & McKay, N. P., Aug 28 2022, In: Geophysical Research Letters. 49, 16, e2022GL099772.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Highly Multiplexed Serology for Nonhuman Mammals

  Schuettenberg, A., Piña, A., Metrailer, M., Peláez-Sánchez, R. G., Agudelo-Flórez, P., Lopez, J. Á., Ryle, L., Monroy, F. P., Altin, J. A. & Ladner, J. T., Sep 2022, In: Microbiology spectrum. 10, 5

  Research output: Contribution to journal › Article › peer-review

  Open Access

• High prevalence of patent foramen ovale in recreational to elite breath hold divers

  Kelly, T., Patrician, A., Bryant-Ekstrand, M., Brown, C., Gasho, C., Caldwell, H. G., Lord, R. N., Dawkins, T., Drane, A., Stembridge, M., Dragun, T., Barak, O., Spajić, B., Drviš, I., Duke, J. W., Foster, G. E., Ainslie, P. N., Dujić, Ž. & Lovering, A. T., Jul 2022, In: Journal of Science and Medicine in Sport. 25, 7, p. 553-556 4 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• High-resolution late Paleozoic cyclostratigraphy and tectonic evolution of the Keeler Basin, California, southwest Laurentia

  Gannon, P. J., Smith, M. E., Umhoefer, P. J. & Leary, R. J., Mar 2022, In: Bulletin of the Geological Society of America. 134, 3-4, p. 1065-1078 14 p.

  Research output: Contribution to journal › Article › peer-review

• High-Resolution Thermophysical Analysis of the OSIRIS-REx Sample Site and Three Other Regions of Interest on Bennu

  Rozitis, B., Ryan, A. J., Emery, J. P., Nolan, M. C., Green, S. F., Christensen, P. R., Hamilton, V. E., Daly, M. G., Barnouin, O. S. & Lauretta, D. S., Jun 2022, In: Journal of Geophysical Research: Planets. 127, 6, e2021JE007153.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Hits and Misses: Newcomers' ability to identify Skills needed for OSS tasks

  Santos, I., Wiese, I., Steinmacher, I., Sarma, A. & Gerosa, M. A., 2022, Proceedings - 2022 IEEE International Conference on Software Analysis, Evolution and Reengineering, SANER 2022. Institute of Electrical and Electronics Engineers Inc., p. 174-183 10 p. (Proceedings - 2022 IEEE International Conference on Software Analysis, Evolution and Reengineering, SANER 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Homeless Opioid Treatment Clients Transitioning to Dependent and Independent Housing: Differential Outcomes by Race/Ethnicity

  Pro, G., Liebert, M., Remiker, M., Sabo, S., Montgomery, B. E. E. & Zaller, N., 2022, In: Substance Use and Misuse. 57, 6, p. 867-875 9 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Host identity and neighborhood trees affect belowground microbial communities in a tropical rainforest

  Cowan, J. A., Gehring, C. A., Ilstedt, U. & Grady, K. C., Jun 2022, In: Tropical Ecology. 63, 2, p. 216-228 13 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• How Ankle Exoskeleton Assistance Affects the Mechanics of Incline Walking and Stair Ascent in Cerebral Palsy

  Fang, Y. & Lerner, Z. F., 2022, 2022 International Conference on Rehabilitation Robotics, ICORR 2022. IEEE Computer Society, (IEEE International Conference on Rehabilitation Robotics; vol. 2022-July).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• How Experimentation in Software Engineering has been taught? Survey and Research Agenda

  Luz, C. D., Oliveirajr, E. & Steinmacher, I. F., Jun 13 2022, Proceedings of the ACM International Conference on Evaluation and Assessment in Software Engineering, EASE 2022. Association for Computing Machinery, p. 299-304 6 p. (ACM International Conference Proceeding Series).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• How Gender-Biased Tools Shape Newcomer Experiences in OSS Projects

  Padala, H. S., Mendez, C., Fronchetti, F., Steinmacher, I., Steine-Hanson, Z., Hilderbrand, C., Horvath, A., Hill, C., Simpson, L., Burnett, M., Gerosa, M. & Sarma, A., Jan 1 2022, In: IEEE Transactions on Software Engineering. 48, 1, p. 241-259 19 p.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• How to Choose a Task? Mismatches in Perspectives of Newcomers and Existing Contributors

  Santos, F., Trinkenreich, B., Pimentel, J. F., Wiese, I., Steinmacher, I., Sarma, A. & Gerosa, M. A., Sep 19 2022, Proceedings of the 16th ACM/IEEE International Symposium on Empirical Software Engineering and Measurement, ESEM 2022. Madeiral, F., Lassenius, C., Lassenius, C., Conte, T. & Mannisto, T. (eds.). IEEE Computer Society, p. 114-124 11 p. (International Symposium on Empirical Software Engineering and Measurement).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• How to Debug Inclusivity Bugs? A Debugging Process with Information Architecture

  Guizani, M., Steinmacher, I., Emard, J., Fallatah, A., Burnett, M. & Sarma, A., 2022, Proceedings - 2022 ACM/IEEE 44th International Conference on Software Engineering: Software Engineering in Society, ICSE-SEIS 2022. IEEE Computer Society, p. 90-101 12 p. (Proceedings - International Conference on Software Engineering).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  1 Scopus citations

• How to Find My Task? Chatbot to Assist Newcomers in Choosing Tasks in OSS Projects

  Serrano Alves, L. P., Wiese, I. S., Chaves, A. P. & Steinmacher, I., 2022, Chatbot Research and Design - 5th International Workshop, CONVERSATIONS 2021, Revised Selected Papers. Følstad, A., Araujo, T., Papadopoulos, S., Law, E. L-C., Luger, E., Goodwin, M. & Brandtzaeg, P. B. (eds.). Springer Science and Business Media Deutschland GmbH, p. 90-107 18 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13171 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Humid tropical vertebrates are at lower risk of extinction and population decline in forests with higher structural integrity

  Pillay, R., Watson, J. E. M., Hansen, A. J., Jantz, P. A., Aragon-Osejo, J., Armenteras, D., Atkinson, S. C., Burns, P., Ervin, J., Goetz, S. J., González-del-Pliego, P., Robinson, N. P., Supples, C., Virnig, A. L. S., Williams, B. A. & Venter, O., Dec 2022, In: Nature Ecology and Evolution. 6, 12, p. 1840-1849 10 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Hybrid effectiveness-implementation study designs in sports injury prevention research

  Root, H. J., Lininger, M. R. & DiStefano, L. J., Sep 20 2022, In: Frontiers in Sports and Active Living. 4, 981656.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

• HydroBench: Jupyter supported reproducible hydrological model benchmarking and diagnostic tool

  Moges, E., Ruddell, B. L., Zhang, L., Driscoll, J. M., Norton, P., Perez, F. & Larsen, L. G., Sep 30 2022, In: Frontiers in Earth Science. 10, 884766.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Hypothalamic remodeling of thyroid hormone signaling during hibernation in the arctic ground squirrel

  Chmura, H. E., Duncan, C., Saer, B., Moore, J. T., Barnes, B. M., Loren Buck, C., Christian, H. C., Loudon, A. S. I. & Williams, C. T., Dec 2022, In: Communications biology. 5, 1, 492.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Hypoxia-inducible factor-1 alpha expression is induced by IL-2 via the PI3K/mTOR pathway in hypoxic NK cells and supports effector functions in NKL cells and ex vivo expanded NK cells

  Cluff, E., Magdaleno, C. C., Fernandez, E., House, T., Swaminathan, S., Varadaraj, A. & Rajasekaran, N., Aug 2022, In: Cancer Immunology, Immunotherapy. 71, 8, p. 1989-2005 17 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Identification of novel, cryptic Clostridioides species isolates from environmental samples collected from diverse geographical locations

  Williamson, C. H. D., Stone, N. E., Nunnally, A. E., Roe, C. C., Vazquez, A. J., Lucero, S. A., Hornstra, H., Wagner, D. M., Keim, P., Rupnik, M., Janezic, S. & Sahl, J. W., 2022, In: Microbial Genomics. 8, 2, 000742.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Identification of the domains within the N2A region of titin that regulate binding to actin

  Tsiros, C., Punch, E., Schaffter, E., Apel, S. & Gage, M. J., Jan 22 2022, In: Biochemical and Biophysical Research Communications. 589, p. 147-151 5 p.

  Research output: Contribution to journal › Article › peer-review