Environment, Forestry, and Natural Sciences, College of the (CEFNS)

Search results

• Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

  Meisel, J. S. (Creator), Nasko, D. J. (Creator), Brubach, B. (Creator), Cepeda-Espinoza, V. (Creator), Chopyk, J. (Creator), Corrada-Bravo, H. (Contributor), Fedarko, M. (Creator), Ghurye, J. (Creator), Javkar, K. (Creator), Olson, N. D. (Creator), Shah, N. (Creator), Allard, S. M. (Creator), Bazinet, A. L. (Creator), Bergman, N. H. (Creator), Brown, A. (Creator), Caporaso, J. G. (Contributor), Conlan, S. (Creator), Diruggiero, J. (Contributor), Forry, S. P. (Creator), Hasan, N. A. (Creator), Kralj, J. (Creator), Luethy, P. M. (Creator), Milton, D. K. (Creator), Ondov, B. D. (Creator), Preheim, S. (Creator), Ratnayake, S. (Contributor), Rogers, S. M. (Creator), Rosovitz, M. J. (Contributor), Sakowski, E. G. (Creator), Schliebs, N. O. (Creator), Sommer, D. D. (Creator), Ternus, K. L. (Creator), Uritskiy, G. (Contributor), Zhang, S. X. (Creator), Pop, M. (Creator) & Treangen, T. J. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.c.4291514, https://figshare.com/collections/Current_progress_and_future_opportunities_in_applications_of_bioinformatics_for_biodefense_and_pathogen_detection_report_from_the_Winter_Mid-Atlantic_Microbiome_Meet-up_College_Park_MD_January_10_2018/4291514

  Dataset

• Appendix A. Details about binning data for outlier identification, sample size for fuzzy c-means cluster analysis, and modifying resistance surfaces or corridor termini to better capture focal land facets.

  Brost, B. M. (Creator) & Beier, P. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.3516950.v1, https://wiley.figshare.com/articles/dataset/Appendix_A_Details_about_binning_data_for_outlier_identification_sample_size_for_fuzzy_c-means_cluster_analysis_and_modifying_resistance_surfaces_or_corridor_termini_to_better_capture_focal_land_facets_/3516950/1

  Dataset

• Murphy Dome: Covariates measured on the sampling units of moss (Hylocomium splendens) from a moss transplant and leaf litter manipulation experiment in three pairs of adjacent black spruce and birchs stands. This data is associated to the file MD_MossBiomass_2013-2015.xlsx

  Jean, M. (Creator), Mack, M. C. (Creator) & Johnstone, J. F. (Creator), Environmental Data Initiative, 2017

  DOI: 10.6073/pasta/56123c8ae622186e9a91b6b4553bcc87, https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-bnz.673.3

  Dataset

• Supplementary material from "Drivers of variation in species impacts for a multi-host fungal disease of bats"

  Langwig, K. E. (Creator), Frick, W. F. (Creator), Hoyt, J. R. (Creator), Parise, K. L. (Creator), Drees, K. P. (Creator), Kunz, T. H. (Creator), Foster, J. T. (Creator) & Kilpatrick, A. M. (Contributor), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3493050.v1, https://figshare.com/collections/Supplementary_material_from_Drivers_of_variation_in_species_impacts_for_a_multi-host_fungal_disease_of_bats_/3493050/1

  Dataset

• Appendix A. Information used to generate predictions for 52 bird species whose edge responses were reported in the recent literature.

  Ries, L. (Creator) & Sisk, T. D. (Creator), wiley, 2016

  DOI: 10.6084/m9.figshare.3523811.v1, https://wiley.figshare.com/articles/dataset/Appendix_A_Information_used_to_generate_predictions_for_52_bird_species_whose_edge_responses_were_reported_in_the_recent_literature_/3523811/1

  Dataset

• Data from: Phytochemical traits underlie genotypic variation in susceptibility of quaking aspen (Populus tremuloides) to browsing by a keystone forest ungulate

  Holeski, L. M. (Contributor), Mckenzie, S. C. (Contributor), Kruger, E. L. (Contributor), Couture, J. J. (Contributor), Rubert-Nason, K. (Contributor) & Lindroth, R. L. (Contributor), Zenodo, Feb 12 2016

  DOI: 10.5061/dryad.8856h, https://zenodo.org/records/4965894

  Dataset

• Appendix B. Tables and figures providing a statistical representation of the observed flux tower carbon fluxes grouped by the plant function type of the site locations.

  Raczka, B. M. (Creator), Davis, K. J. (Creator), Huntzinger, D. (Creator), Neilson, R. P. (Creator), Poulter, B. (Creator), Richardson, A. D. (Creator), Xiao, J. (Contributor), Baker, I. (Creator), Ciais, P. (Creator), Keenan, T. F. (Creator), Law, B. (Creator), Post, W. M. (Creator), Ricciuto, D. (Creator), Schaefer, K. (Creator), Tian, H. (Contributor), Tomelleri, E. (Creator), Verbeeck, H. (Creator) & Viovy, N. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3568320, https://wiley.figshare.com/articles/dataset/Appendix_B_Tables_and_figures_providing_a_statistical_representation_of_the_observed_flux_tower_carbon_fluxes_grouped_by_the_plant_function_type_of_the_site_locations_/3568320

  Dataset

• Processed multichannel seismic data (brute stacks) in the Gulf of California, acquired during the R/V Maurice Ewing survey EW0210 (2002)

  Lizarralde, D. (Creator), Axen, G. J. (Creator), González-Fernández, A. (Contributor), Harding, A. J. (Creator), Holbrook, W. S. (Creator), Kent, G. M. (Creator) & Umhoefer, P. J. (Creator), Interdisciplinary Earth Data Alliance (IEDA), 2018

  DOI: 10.1594/ieda/500101, https://www.marine-geo.org/doi/10.1594/IEDA/500101

  Dataset

• Canopy Cover - Africa

  Hansen, A. (Creator), Barnett, K. (Creator), Jantz, P. (Creator), Phillips, L. (Creator), Goetz, S. J. (Creator), Hansen, M. (Creator), Venter, O. (Creator), Watson, J. E. M. (Creator), Burns, P. (Creator), Atkinson, S. (Contributor), Rodríguez-Buritica, S. (Creator), Ervin, J. (Creator), Virnig, A. (Creator) & Supples, C. (Creator), figshare, 2019

  DOI: 10.6084/m9.figshare.8411756, https://springernature.figshare.com/articles/Canopy_Cover_-_Africa/8411756

  Dataset

• Data from: Large effect quantitative trait loci for salicinoid phenolic glycosides in Populus: Implications for gene discovery

  Woolbright, S. A. (Creator), Rehill, B. J. (Creator), Lindroth, R. L. (Creator), DiFazio, S. P. (Creator), Martinsen, G. D. (Creator), Zinkgraf, M. S. (Creator), Allan, G. J. (Creator), Keim, P. (Creator) & Whitham, T. G. (Creator), Dryad Digital Repository, 2018

  DOI: 10.5061/dryad.8h67t.1, https://datadryad.org/resource/doi:10.5061/dryad.8h67t.1

  Dataset

• Remote sensing derived maps of tamarisk (2009) and beetle impacts (2013) along 412 km of the Colorado River in the Grand Canyon, Arizona

  Bedford, A. (Creator), Sankey, T. T. (Creator), Sankey, J. B. (Creator), Durning, L. (Creator) & Ralston, B. E. (Creator), U.S. Geological Survey, 2018

  DOI: 10.5066/f72b8x71, https://www.sciencebase.gov/catalog/item/5a144ec0e4b09fc93dcfcffa

  Dataset

• Crystal Structure of the Multidrug effulx transporter BpeF from Burkholderia pseudomallei.

  Kato, T. (Contributor), Okada, U. (Contributor), Hung, L.-W. (Contributor), Yamashita, E. (Contributor), Kim, H.-B. (Contributor), Kim, C.-Y. (Contributor), Terwilliger, T. C. (Contributor), Schweizer, H. P. (Contributor) & Murakami, S. (Contributor), Protein Data Bank (PDB), Jul 19 2023

  DOI: 10.2210/pdb7WLV/pdb, https://www.wwpdb.org/pdb?id=pdb_00007wlv

  Dataset

• Data from: Bud phenology and growth are subject to divergent selection across a latitudinal gradient in Populus angustifolia and impact adaptation across the distributional range and associated arthropods

  Evans, L. M. (Creator), Kaluthota, S. (Creator), Pearce, D. W. (Creator), Allan, G. J. (Creator), Floate, K. (Creator), Rood, S. B. (Creator) & Whitham, T. G. (Creator), DRYAD, Jun 3 2017

  DOI: 10.5061/dryad.ch720, https://datadryad.org/stash/dataset/doi:10.5061/dryad.ch720

  Dataset

• Weekly Large Wildfire Probability in Western US Forests and Woodlands, 2005-2017

  Gray, M. E. (Creator), Zachmann, L. J. (Creator) & Dickson, B. G. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.5765967, https://figshare.com/articles/Weekly_Large_Wildfire_Probability_in_Western_US_Forests_andWoodlands_2005-2017/5765967/1

  Dataset

• Estimated herd prevalence and sequence types of Coxiella burnetii in bulk tank milk samples from commercial dairies in Indiana

  Bauer, A. E. (Creator), Olivas, S. (Contributor), Cooper, M. (Creator), Hornstra, H. (Creator), Keim, P. (Creator), Pearson, T. (Contributor) & Johnson, A. J. (Creator), figshare Academic Research System, 2015

  DOI: 10.6084/m9.figshare.c.3645449.v1, https://figshare.com/collections/Estimated_herd_prevalence_and_sequence_types_of_Coxiella_burnetii_in_bulk_tank_milk_samples_from_commercial_dairies_in_Indiana/3645449/1

  Dataset

• Additional file 1: of Estimated herd prevalence and sequence types of Coxiella burnetii in bulk tank milk samples from commercial dairies in Indiana

  Bauer, A. E. (Creator), Olivas, S. (Contributor), Cooper, M. (Creator), Hornstra, H. (Creator), Keim, P. (Creator), Pearson, T. (Contributor) & Johnson, A. J. (Creator), figshare Academic Research System, 2015

  DOI: 10.6084/m9.figshare.c.3645449_d1.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Estimated_herd_prevalence_and_sequence_types_of_Coxiella_burnetii_in_bulk_tank_milk_samples_from_commercial_dairies_in_Indiana/4472084/1

  Dataset

• Supplementary material from: Aslan CE, Sikes BA, Gedan KB (2015) Research on mutualisms between native and non-native partners can contribute critical ecological insights. NeoBiota 26: 39-54. https://doi.org/10.3897/neobiota.26.8837

  Aslan, C. E. (Contributor), Sikes, B. A. (Contributor) & Gedan, K. B. (Contributor), Zenodo, Jul 23 2015

  DOI: 10.5281/zenodo.902584, https://zenodo.org/record/902584

  Dataset

• Growth and death of bacteria and fungi underlie rainfall-induced carbon dioxide pulses from seasonally dried soil

  Blazewicz, S. J. (Creator), Schwartz, E. (Creator) & Firestone, M. K. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3306693, https://figshare.com/collections/Growth_and_death_of_bacteria_and_fungi_underlie_rainfall-induced_carbon_dioxide_pulses_from_seasonally_dried_soil/3306693

  Dataset

• Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia

  Williamson, C. H. D. (Creator), Sahl, J. W. (Creator), Smith, T. J. (Creator), Xie, G. (Creator), Foley, B. T. (Creator), Smith, L. A. (Creator), Fernández, R. A. (Contributor), Lindström, M. (Contributor), Korkeala, H. (Creator), Keim, P. (Creator), Foster, J. (Creator) & Hill, K. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3630344, https://figshare.com/collections/Comparative_genomic_analyses_reveal_broad_diversity_in_botulinum-toxin-producing_Clostridia/3630344

  Dataset

• PLANT GENES LINK FORESTS AND STREAMS

  LeRoy, C. J. (Creator), Whitham, T. G. (Creator), Keim, P. (Creator) & Marks, J. C. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3298964, https://figshare.com/collections/PLANT_GENES_LINK_FORESTS_AND_STREAMS/3298964

  Dataset

• Supplement 1. Macroinvertebrate community matrix data.

  LeRoy, C. J. (Creator), Whitham, T. G. (Creator), Keim, P. (Creator) & Marks, J. C. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3525674, https://wiley.figshare.com/articles/dataset/Supplement_1_Macroinvertebrate_community_matrix_data_/3525674

  Dataset

• Appendix B. Tables summarizing the canopy cover and tree density inside and outside livestock exclosures at five sites in northern Arizona in 1941 and 2004.

  Bakker, J. D. (Creator) & Moore, M. M. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3528248, https://wiley.figshare.com/articles/dataset/Appendix_B_Tables_summarizing_the_canopy_cover_and_tree_density_inside_and_outside_livestock_exclosures_at_five_sites_in_northern_Arizona_in_1941_and_2004_/3528248

  Dataset

• MYCORRHIZAL COMMUNITY DYNAMICS FOLLOWING NITROGEN FERTILIZATION: A CROSS-SITE TEST IN FIVE GRASSLANDS

  Egerton-Warburton, L. M. (Creator), Johnson, N. C. (Creator) & Allen, E. B. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3309309, https://figshare.com/collections/MYCORRHIZAL_COMMUNITY_DYNAMICS_FOLLOWING_NITROGEN_FERTILIZATION_A_CROSS-SITE_TEST_IN_FIVE_GRASSLANDS/3309309

  Dataset

• Appendix A. A table listing the identified phospholipid fatty acid (PLFA) biomarkers found in the soil samples.

  Schweitzer, J. A. (Creator), Bailey, J. K. (Creator), Fischer, D. G. (Creator), LeRoy, C. J. (Creator), Lonsdorf, E. V. (Creator), Whitham, T. G. (Creator) & Hart, S. C. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3529049, https://wiley.figshare.com/articles/dataset/Appendix_A_A_table_listing_the_identified_phospholipid_fatty_acid_PLFA_biomarkers_found_in_the_soil_samples_/3529049

  Dataset

• Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Kang, D.-W. (Contributor), Adams, J. B. (Creator), Gregory, A. C. (Creator), Borody, T. (Creator), Chittick, L. (Creator), Fasano, A. (Creator), Khoruts, A. (Creator), Geis, E. (Creator), Maldonado, J. (Creator), McDonough-Means, S. (Creator), Pollard, E. L. (Creator), Roux, S. (Creator), Sadowsky, M. J. (Creator), Lipson, K. S. (Creator), Sullivan, M. B. (Creator), Caporaso, J. G. (Contributor) & Krajmalnik-Brown, R. (Creator), figshare, 2017

  DOI: 10.6084/m9.figshare.c.3674866, https://figshare.com/collections/Microbiota_Transfer_Therapy_alters_gut_ecosystem_and_improves_gastrointestinal_and_autism_symptoms_an_open-label_study/3674866

  Dataset