Engineering, Steve Sanghi College of

2024

AFM Special Issue Summary - Integrating Surface Flux with Boundary Layer Measurements

Faiola, C. L., Helbig, M., Zhang, Y., Beamesderfer, E. R., Sanchez-Mejia, Z. M., Yáñez-Serrano, A. M. & Richardson, A. D., Mar 1 2024, In: Agricultural and Forest Meteorology. 346, 109872.

Research output: Contribution to journal › Comment/debate › peer-review

Correction to: Landscape-scale benefits of protected areas for tropical biodiversity (Nature, (2023), 620, 7975, (807-812), 10.1038/s41586-023-06410-z)

Brodie, J. F., Mohd-Azlan, J., Chen, C., Wearn, O. R., Deith, M. C. M., Ball, J. G. C., Slade, E. M., Burslem, D. F. R. P., Teoh, S. W., Williams, P. J., Nguyen, A., Moore, J. H., Goetz, S. J., Burns, P., Jantz, P., Hakkenberg, C. R., Kaszta, Z. M., Cushman, S., Coomes, D. & Helmy, O. E. & 4 others, Reynolds, G., Rodríguez, J. P., Jetz, W. & Luskin, M. S., Apr 25 2024, In: Nature. 628, 8009, p. E5

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

Erratum: Author Correction: A policy-driven framework for conserving the best of Earth's remaining moist tropical forests (Nature ecology & evolution (2020) 4 10 DOI: 10.1038/s41559-020-1274-7)

Hansen, A. J., Burns, P., Ervin, J., Goetz, S. J., Hansen, M., Venter, O., Watson, J. E. M., Jantz, P. A., Virnig, A. L. S., Barnett, K., Pillay, R., Atkinson, S., Supples, C., Rodríguez-Buritica, S. & Armenteras, D., Dec 1 2024, In: Nature Ecology and Evolution. 8, 12, p. 2336 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Publisher Correction: Landscape-scale benefits of protected areas for tropical biodiversity (Nature, (2023), 620, 7975, (807-812), 10.1038/s41586-023-06410-z)

Brodie, J. F., Mohd-Azlan, J., Chen, C., Wearn, O. R., Deith, M. C. M., Ball, J. G. C., Slade, E. M., Burslem, D. F. R. P., Teoh, S. W., Williams, P. J., Nguyen, A., Moore, J. H., Goetz, S. J., Burns, P., Jantz, P., Hakkenberg, C. R., Kaszta, Z. M., Cushman, S., Coomes, D. & Helmy, O. E. & 4 others, Reynolds, G., Rodríguez, J. P., Jetz, W. & Luskin, M. S., Jan 25 2024, In: Nature. 625, 7996, p. E28

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

Using Explainable AI for Neural Network-Based Network Attack Detection

Zou, Q., Zhang, L., Sun, X., Singhal, A., Liu, P. & Lin, H. Y., May 1 2024, In: Computer. 57, 5, p. 78-85 8 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

2023

Canopy structure from space using GEDI lidar

Hakkenberg, C. R., Tang, H., Burns, P. & Goetz, S. J., Feb 2023, In: Frontiers in Ecology and the Environment. 21, 1, p. 55-56 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

12 Scopus citations

2022

Assessing intra-annual density fluctuations across and along white pine stems

Miller, E. W., Rademacher, T., Fonti, P., Seyednasrollah, B. & Richardson, A. D., 2022, In: Botany. 100, 7, p. 583-591 9 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

1 Scopus citations

Open data facilitate resilience in science during the COVID-19 pandemic

Record, S., Jarzyna, M. A., Hardiman, B. & Richardson, A. D., Mar 2022, In: Frontiers in Ecology and the Environment. 20, 2, p. 76-77 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

4 Scopus citations

2021

Author Correction: Anthropogenic modification of forests means only 40% of remaining forests have high ecosystem integrity (Nature Communications, (2020), 11, 1, (5978), 10.1038/s41467-020-19493-3)

Grantham, H. S., Duncan, A., Evans, T. D., Jones, K. R., Beyer, H. L., Schuster, R., Walston, J., Ray, J. C., Robinson, J. G., Callow, M., Clements, T., Costa, H. M., DeGemmis, A., Elsen, P. R., Ervin, J., Franco, P., Goldman, E., Goetz, S., Hansen, A. & Hofsvang, E. & 28 others, Jantz, P., Jupiter, S., Kang, A., Langhammer, P., Laurance, W. F., Lieberman, S., Linkie, M., Malhi, Y., Maxwell, S., Mendez, M., Mittermeier, R., Murray, N. J., Possingham, H., Radachowsky, J., Saatchi, S., Samper, C., Silverman, J., Shapiro, A., Strassburg, B., Stevens, T., Stokes, E., Taylor, R., Tear, T., Tizard, R., Venter, O., Visconti, P., Wang, S. & Watson, J. E. M., Dec 1 2021, In: Nature Communications. 12, 1, 592.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

2 Scopus citations

2020

All kinds of integration: WMO's strategy for seamless prediction

Ruti, P., Tarasova, O., Keller, J., Carmichael, G., Hov, Ø., Jones, S., Terblanche, D., Anderson-Lefale, C., Barros, A., Bauer, P., Bouchet, V., Brasseur, G., Brunet, G., DeCola, P., Dike, V., Kane, M. D., Gan, C., Gurney, K., Hamburg, S. & Hazeleger, W. & 20 others, Jean, M., Johnston, D., Lewis, A., Li, P., Liang, X., Lucarini, V., Lynch, A., Manaenkova, E., Jae-Cheol, N., Ohtake, S., Pinardi, N., Polcher, J., Ritchie, E., Sakya, A. E., Saulo, C., Singhee, A., Sopaheluwakan, A., Steiner, A., Thorpe, A. & Yamaji, M., Jun 2020, In: Bulletin of the American Meteorological Society. 101, 6, p. 509-512 4 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

1 Scopus citations

Plant carbon allocation in a changing world – challenges and progress: introduction to a Virtual Issue on carbon allocation: Introduction to a virtual issue on carbon allocation

Hartmann, H., Bahn, M., Carbone, M. & Richardson, A. D., Aug 1 2020, In: New Phytologist. 227, 4, p. 981-988 8 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

122 Scopus citations

Publisher Correction: The tuatara genome reveals ancient features of amniote evolution (Nature, (2020), 584, 7821, (403-409), 10.1038/s41586-020-2561-9)

Ngatiwai Trust Board, Sep 3 2020, In: Nature. 585, 7823, p. E3

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

2019

Author Correction: Global diversity and biogeography of bacterial communities in wastewater treatment plants (Nature Microbiology, (2019), 4, 7, (1183-1195), 10.1038/s41564-019-0426-5)

Global Water Microbiome Consortium, Dec 1 2019, In: Nature Microbiology. 4, 12, p. 2579 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

11 Scopus citations

Author Correction: Carbon stocks in central African forests enhanced by elephant disturbance (Nature Geoscience, (2019), 12, 9, (725-729), 10.1038/s41561-019-0395-6)

Berzaghi, F., Longo, M., Ciais, P., Blake, S., Bretagnolle, F., Vieira, S., Scaranello, M., Scarascia-Mugnozza, G. & Doughty, C. E., Dec 1 2019, In: Nature Geoscience. 12, 12, p. 1050 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (Nature Biotechnology, (2019), 37, 8, (852-857), 10.1038/s41587-019-0209-9)

Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N. A., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., Bai, Y., Bisanz, J. E., Bittinger, K., Brejnrod, A., Brislawn, C. J., Brown, C. T., Callahan, B. J., Caraballo-Rodríguez, A. M., Chase, J. & Cope, E. K. & 92 others, Da Silva, R., Diener, C., Dorrestein, P. C., Douglas, G. M., Durall, D. M., Duvallet, C., Edwardson, C. F., Ernst, M., Estaki, M., Fouquier, J., Gauglitz, J. M., Gibbons, S. M., Gibson, D. L., Gonzalez, A., Gorlick, K., Guo, J., Hillmann, B., Holmes, S., Holste, H., Huttenhower, C., Huttley, G. A., Janssen, S., Jarmusch, A. K., Jiang, L., Kaehler, B. D., Kang, K. B., Keefe, C. R., Keim, P., Kelley, S. T., Knights, D., Koester, I., Kosciolek, T., Kreps, J., Langille, M. G. I., Lee, J., Ley, R., Liu, Y. X., Loftfield, E., Lozupone, C., Maher, M., Marotz, C., Martin, B. D., McDonald, D., McIver, L. J., Melnik, A. V., Metcalf, J. L., Morgan, S. C., Morton, J. T., Naimey, A. T., Navas-Molina, J. A., Nothias, L. F., Orchanian, S. B., Pearson, T., Peoples, S. L., Petras, D., Preuss, M. L., Pruesse, E., Rasmussen, L. B., Rivers, A., Robeson, M. S., Rosenthal, P., Segata, N., Shaffer, M., Shiffer, A., Sinha, R., Song, S. J., Spear, J. R., Swafford, A. D., Thompson, L. R., Torres, P. J., Trinh, P., Tripathi, A., Turnbaugh, P. J., Ul-Hasan, S., van der Hooft, J. J. J., Vargas, F., Vázquez-Baeza, Y., Vogtmann, E., von Hippel, M., Walters, W., Wan, Y., Wang, M., Warren, J., Weber, K. C., Williamson, C. H. D., Willis, A. D., Xu, Z. Z., Zaneveld, J. R., Zhang, Y., Zhu, Q., Knight, R. & Caporaso, J. G., Sep 1 2019, In: Nature Biotechnology. 37, 9, p. 1091 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

431 Scopus citations

Correction: Using near-infrared enabled digital repeat photography to track structural and physiological phenology in mediterranean tree-grass ecosystems. [Remote sens, 10, (2018) (1293)] DOI: 10.3390/rs10081293

Luo, Y., El-Madany, T. S., Filippa, G., Ma, X., Ahrens, B., Carrara, A., Gonzalez-Cascon, R., Cremonese, E., Galvagno, M., Hammer, T. W., Pacheco-Labrador, J., Martín, M. P., Moreno, G., Perez-Priego, O., Reichstein, M., Richardson, A. D., Römermann, C. & Migliavacca, M., 2019, In: Remote Sensing. 11, 6, 726.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

Corrigendum: Climate change and future power systems: The importance of energy storage in reduced-hydropower systems in the American Southwest (Clean Energy (2019) 3:4 (324) DOI: 10.1093/ce/zkz018)

Wadsack, K. & Acker, T. L., Dec 6 2019, In: Clean Energy. 3, 4, p. 324 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

Publisher Correction: Tracking vegetation phenology across diverse biomes using Version 2.0 of the PhenoCam Dataset (Scientific Data, (2019), 6, 1, (222), 10.1038/s41597-019-0229-9)

Seyednasrollah, B., Young, A. M., Hufkens, K., Milliman, T., Friedl, M. A., Frolking, S. & Richardson, A. D., Dec 1 2019, In: Scientific Data. 6, 1, 261.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

7 Scopus citations

2018

Hyperactive soil microbes might weaken the terrestrial carbon sink

Ogle, K., Aug 2 2018, In: Nature. 560, 7716, p. 32-33 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

23 Scopus citations

2017

Technology designed to address poor network environments

Brunette, W., Vigil, M., Pervaiz, F., Levari, S., Borriello, G. & Anderson, R., Oct 2017, In: Communications of the ACM. 60, 10, p. 47 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

2016

A Step Forward to Empower Global Microbiome Research Through Local Leadership

The Working Group Supporting the INCT Microbiome, Oct 1 2016, In: Trends in Microbiology. 24, 10, p. 767-771 5 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

9 Scopus citations

Correction: A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family Geminiviridae implicated in grapevine redleaf disease by next-generation sequencing

Poojari, S., Alabi, O. J., Fofanov, V. Y. & Naidu, R. A., Jan 2016, In: PLoS ONE. 11, 1, e0147510.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

2 Scopus citations

2015

Depth effect in deep beams

Birrcher, D. B., Tuchscherer, R. G., Huizinga, M. & Bayrak, O., May 1 2015, In: ACI Structural Journal. 112, 3, p. 407-408 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

2014

Advancing the microbiome research community

Huttenhower, C., Knight, R., Brown, C. T., Caporaso, J. G., Clemente, J. C., Gevers, D., Franzosa, E. A., Kelley, S. T., Knights, D., Ley, R. E., Mahurkar, A., Ravel, J. & White, O., Oct 9 2014, In: Cell. 159, 2, p. 227-230 4 p.

Research output: Contribution to journal › Comment/debate › peer-review

50 Scopus citations

Minimum web reinforcement in deep beams

Birrcher, D. B., Tuchscherer, R. G., Huizinga, M. & Bayrak, O., Jan 2014, In: ACI Structural Journal. 111, 1, p. 224-225 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

3 Scopus citations

2013

Collaborative cloud-enabled tools allow rapid, reproducible biological insights

Ragan-Kelley, B., Walters, W. A., McDonald, D., Riley, J., Granger, B. E., Gonzalez, A., Knight, R., Perez, F. & Caporaso, J. G., Mar 2013, In: ISME Journal. 7, 3, p. 461-464 4 p.

Research output: Contribution to journal › Comment/debate › peer-review

19 Scopus citations

2012

Comparison of Illumina paired-end and single-direction sequencing for microbial 16S rRNA gene amplicon surveys

Werner, J. J., Zhou, D., Caporaso, J. G., Knight, R. & Angenent, L. T., Jul 2012, In: ISME Journal. 6, 7, p. 1273-1276 4 p.

Research output: Contribution to journal › Comment/debate › peer-review

95 Scopus citations

The Biological Observation Matrix (BIOM) format or: How I learned to stop worrying and love the ome-ome

McDonald, D., Clemente, J. C., Kuczynski, J., Rideout, J. R., Stombaugh, J., Wendel, D., Wilke, A., Huse, S., Hufnagle, J., Meyer, F., Knight, R. & Caporaso, J. G., Jul 12 2012, In: GigaScience. 464, 1, 7.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

591 Scopus citations

2011

Confinement of deep beam nodal regions

Tuchscherer, R., Birrcher, D., Huizinga, M., Bayrak, O. & Windisch, A., Sep 2011, In: ACI Structural Journal. 108, 5, p. 644-645 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

2 Scopus citations

2006

Energy planning for Indian nations within the WRAP: A field guide

Acker, T. L., Jones, C. & Smith, D. H., 2006, In: American Indian Culture and Research Journal. 30, 4, p. 115-132 18 p.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

1 Scopus citations

1999

Zebrafish in the net

Westerfield, M., Doerry, E. & Douglas, S., Jun 1 1999, In: Trends in Genetics. 15, 6, p. 248-249 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

15 Scopus citations

1993

Additions and Corrections: Subsurface Interactions of Humic Substances with Cu(II) in Saturated Media (Environ. Sci. Technol., (1993), 27 (6), (1045–1051)(10.1021/es00043a002))

Odem, W., Amy, G. L. & Conklin, M., 1993, In: Environmental Science and Technology. 27, 13, p. 2919 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Erratum: Subsurface interactions of humic substances with Cu(II) in saturated media (Environmental Science and Technology (1993) 27 (1045-1051))

Odem, W. I., Amy, G. L. & Conklin, M., 1993, In: Environmental Science and Technology. 27, 13, p. 2919 1 p.

Research output: Contribution to journal › Comment/debate › peer-review

Engineering, Steve Sanghi College of

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