Engineering, Steve Sanghi College of

2025

How are discussions linked? A link analysis study on GitHub Discussions

Lima, M., Steinmacher, I., Ford, D., Vorreuter, G., Gonçalves, L., Conte, T. & Gadelha, B., Jan 2025, In: Journal of Systems and Software. 219, 112196.

Research output: Contribution to journal › Article › peer-review

Software solutions for newcomers’ onboarding in software projects: A systematic literature review

Santos, I., Felizardo, K. R., Steinmacher, I. & Gerosa, M. A., Jan 2025, In: Information and Software Technology. 177, 107568.

Research output: Contribution to journal › Article › peer-review

2024

A bi-fidelity DeepONet approach for modeling hysteretic systems under uncertainty

De, S. & Brewick, P. T., Nov 2024, In: Applied Mathematical Modelling. 135, p. 708-728 21 p.

Research output: Contribution to journal › Article › peer-review

An inaugural forum on epidemiological modeling for public health stakeholders in Arizona

Mihaljevic, J. R., Chief, C., Malik, M., Oshinubi, K., Doerry, E., Gel, E., Hepp, C., Lant, T., Mehrotra, S. & Sabo, S., 2024, In: Frontiers in Public Health. 12, 1357908.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

A Semi-Mechanistic Model for Partitioning Evapotranspiration Reveals Transpiration Dominates the Water Flux in Drylands

Reich, E. G., Samuels-Crow, K., Bradford, J. B., Litvak, M., Schlaepfer, D. R. & Ogle, K., Jul 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 7, e2023JG007914.

Research output: Contribution to journal › Article › peer-review

Assessing contemporary Arctic habitat availability for a woolly mammoth proxy

Poquérusse, J., Brown, C. L., Gaillard, C., Doughty, C., Dalén, L., Gallagher, A. J., Wooller, M., Zimov, N., Church, G. M., Lamm, B. & Hysolli, E., Dec 2024, In: Scientific Reports. 14, 1, 9804.

Research output: Contribution to journal › Article › peer-review

Open Access

Assessment of the Climate Trace global powerplant CO₂ emissions

Gurney, K., Aslam, B., Dass, P., Gawuc, L., Hocking, T., Barber, J. J. & Kato, A., Nov 1 2024, In: Environmental Research Letters. 19, 11, 114062.

Research output: Contribution to journal › Article › peer-review

Open Access

Asteroid Period Solutions from Combined Dense and Sparse Photometry

Gowanlock, M., Trilling, D. E., McNeill, A., Kramer, D. & Chernyavskaya, M., Oct 1 2024, In: Astronomical Journal. 168, 4, 181.

Research output: Contribution to journal › Article › peer-review

Open Access

A synthesized field survey database of vegetation and active-layer properties for the Alaskan tundra (1972-2020)

Zhu, X., Chen, D., Kogure, M., Hoy, E., Berner, L. T., Breen, A. L., Chatterjee, A., Davidson, S. J., Frost, G. V., Hollingsworth, T. N., Iwahana, G., Jandt, R. R., Kade, A. N., Loboda, T. V., MacAnder, M. J., Mack, M., Miller, C. E., Miller, E. A., Natali, S. M. & Raynolds, M. K. & 9 others, Rocha, A. V., Tsuyuzaki, S., Tweedie, C. E., Walker, D. A., Williams, M., Xu, X., Zhang, Y., French, N. & Goetz, S., Aug 16 2024, In: Earth System Science Data. 16, 8, p. 3687-3703 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

Basic nanoconvective flow for transient hot wire experimental method

Vadasz, P., Capone, F. & De Luca, R., Jul 2024, In: Acta Mechanica. 235, 7, p. 4435-4450 16 p.

Research output: Contribution to journal › Article › peer-review

Can AI serve as a substitute for human subjects in software engineering research?

Gerosa, M., Trinkenreich, B., Steinmacher, I. & Sarma, A., May 2024, In: Automated Software Engineering. 31, 1, 13.

Research output: Contribution to journal › Article › peer-review

Open Access

6 Scopus citations

Canopy temperature dynamics are closely aligned with ecosystem water availability across a water- to energy-limited gradient

Javadian, M., Scott, R. L., Woodgate, W., Richardson, A. D., Dannenberg, M. P. & Smith, W. K., Oct 15 2024, In: Agricultural and Forest Meteorology. 357, 110206.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

CoCO2-MOSAIC 1.0: A global mosaic of regional, gridded, fossil, and biofuel CO₂ emission inventories

Urraca, R., Janssens-Maenhout, G., Álamos, N., Berna-Peña, L., Crippa, M., Darras, S., Dellaert, S., Denier Van Der Gon, H., Dowell, M., Gobron, N., Granier, C., Grassi, G., Guevara, M., Guizzardi, D., Gurney, K., Huneeus, N., Keita, S., Kuenen, J., Lopez-Noreña, A. & Puliafito, E. & 4 others, Roest, G., Rossi, S., Soulie, A. & Visschedijk, A., Jan 22 2024, In: Earth System Science Data. 16, 1, p. 501-523 23 p.

Research output: Contribution to journal › Article › peer-review

Open Access

ColiSeq: a multiplex amplicon assay that provides strain level resolution of Escherichia coli directly from clinical specimens

Williamson, C. H. D., Vazquez, A. J., Nunnally, A. E., Kyger, K., Fofanov, V. Y., Furstenau, T. N., Hornstra, H. M., Terriquez, J., Keim, P. & Sahl, J. W., Jun 2024, In: Microbiology spectrum. 12, 6

Research output: Contribution to journal › Article › peer-review

Open Access

Combining terrestrial lidar with single line transects to investigate geomorphic change: A case study on the Upper Verde River, Arizona

Tango, L. L., Sankey, T. T., Leonard, J., Sankey, J. B. & Kasprak, A., Jul 15 2024, In: Geomorphology. 457, 109231.

Research output: Contribution to journal › Article › peer-review

Open Access

Communicating Study Design Trade-offs in Software Engineering

Robillard, M. P., Arya, D. M., Ernst, N. A., Guo, J. L. C., Lamothe, M., Nassif, M., Novielli, N., Serebrenik, A., Steinmacher, I. & Stol, K. J., Jun 4 2024, In: ACM Transactions on Software Engineering and Methodology. 33, 5, 112.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Comparing the Efficacy of Rapid Review With a Systematic Review in the Software Engineering Field

Pena, C., Cartaxo, B., Steinmacher, I., Badampudi, D., da Silva, D., Ferreira, W., Almeida, A., Kamei, F. & Soares, S., 2024, (Accepted/In press) In: Journal of software: Evolution and Process.

Research output: Contribution to journal › Article › peer-review

Correlates of Co-Infection with Coccidiosis and Avian Malaria in House Finches (Haemorhous mexicanus)

Penha, V. A. D. S., Manica, L. T., Barrand, Z. A., Hepp, C. M. & McGraw, K. J., Jul 1 2024, In: Journal of wildlife diseases. 60, 3, p. 634-646 13 p.

Research output: Contribution to journal › Article › peer-review

Decades-old carbon reserves are widespread among tree species, constrained only by sapwood longevity

Peltier, D. M. P., Carbone, M. S., Ogle, K., Koch, G. W. & Richardson, A. D., 2024, (Accepted/In press) In: New Phytologist.

Research output: Contribution to journal › Article › peer-review

DeepPhenoMem V1.0: Deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology

Liu, G., Migliavacca, M., Reimers, C., Kraft, B., Reichstein, M., Richardson, A. D., Wingate, L., Delpierre, N., Yang, H. & Winkler, A. J., Sep 12 2024, In: Geoscientific Model Development. 17, 17, p. 6683-6701 19 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Developing national complementary indicators of SDG15 that consider forest quality: Applications in Colombia, Ecuador, and Peru

Hansen, A. J., Aragon-Osejo, J., González, I., Veneros, J., Virnig, A. L. S., Jantz, P., Venter, O., Goetz, S., Watson, J. E. M., Cordoba, N., Rodriguez, S., Monroy, L., Iglesias, J., Beltrán, L., Borja, D., Ureta, D., Tingo, J., Oñate, C., Valencia, F. & Zambrano, H. & 9 others, Pequeño, T., Llactayo, W., Huamani, W., Duran, P., Arana, A., Arenas, M., Pasquel, C., Tovar, A. & Huerta, P., Feb 2024, In: Ecological Indicators. 159, 111654.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

Do topographic changes tell us about variability in aeolian sediment transport and dune mobility? Analysis of monthly to decadal surface changes in a partially vegetated and biocrust covered dunefield

Caster, J., Sankey, J. B., Sankey, T. T., Kasprak, A., Bowker, M. A. & Joyal, T., Feb 15 2024, In: Geomorphology. 447, 109021.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Evaluation of Leaf Phenology of Different Vegetation Types From Local to Hemispheric Scale in CLM

Li, X., Carrillo, C. M., Ault, T., Richardson, A. D., Friedl, M. A. & Frolking, S., Oct 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 10, e2024JG008261.

Research output: Contribution to journal › Article › peer-review

Open Access

Exoskeleton gait training on real-world terrain improves spatiotemporal performance in cerebral palsy

Tagoe, E. A., Fang, Y., Williams, J. R., Stone, J. L. & Lerner, Z. F., 2024, In: Frontiers in Bioengineering and Biotechnology. 12, 1503050.

Research output: Contribution to journal › Article › peer-review

Open Access

Experimental Whole-Ecosystem Warming Enables Novel Estimation of Snow Cover and Depth Sensitivities to Temperature, and Quantification of the Snow-Albedo Feedback Effect

Richardson, A. D., Schädel, C., Westergaard-Nielsen, A., Novick, K. A., Basler, D., Phillips, J. R., Krassovski, M. B., Warren, J. M., Sebestyen, S. D. & Hanson, P. J., Mar 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 3, e2023JG007833.

Research output: Contribution to journal › Article › peer-review

Open Access

Forest carbon uptake as influenced by snowpack and length of photosynthesis season in seasonally snow-covered forests of North America

Yang, J. C., Bowling, D. R., Smith, K. R., Kunik, L., Raczka, B., Anderegg, W. R. L., Bahn, M., Blanken, P. D., Richardson, A. D., Burns, S. P., Bohrer, G., Desai, A. R., Arain, M. A., Staebler, R. M., Ouimette, A. P., Munger, J. W. & Litvak, M. E., Jun 15 2024, In: Agricultural and Forest Meteorology. 353, 110054.

Research output: Contribution to journal › Article › peer-review

Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts

Sankey, T. T., Tango, L., Tatum, J. & Sankey, J. B., Mar 2024, In: Landscape Ecology. 39, 3, 58.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

Functional Labeled Optimal Partitioning

Kaufman, J. M., Stenberg, A. J. & Hocking, T. D., 2024, In: Journal of Computational and Graphical Statistics. 33, 4, p. 1131-1138 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Guidelines for Cultivating a Sense of Belonging to Reduce Developer Burnout

Trinkenreich, B., Gerosa, M. A., Steinmacher, I. & Sarma, A., 2024, (Accepted/In press) In: IEEE Software. p. 1-7 7 p.

Research output: Contribution to journal › Article › peer-review

Guiding the way: A systematic literature review on mentoring practices in open source software projects

Feng, Z., Kimura, K., Trinkenreich, B., Sarma, A. & Steinmacher, I., Jul 2024, In: Information and Software Technology. 171, 107470.

Research output: Contribution to journal › Article › peer-review

Historical tree phenology data reveal the seasonal rhythms of the Congo Basin rainforest

Kearsley, E., Verbeeck, H., Stoffelen, P., Janssens, S. B., Yakusu, E. K., Kosmala, M., De Mil, T., Bauters, M., Kitima, E. R., Ndiapo, J. M., Chuda, A. L., Richardson, A. D., Wingate, L., Ilondea, B. A., Beeckman, H., van den Bulcke, J., Boeckx, P. & Hufkens, K., Apr 2024, In: Plant-Environment Interactions. 5, 2, e10136.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

How do annotations affect Java code readability?

Guerra, E., Gomes, E., Ferreira, J., Wiese, I., Lima, P., Gerosa, M. & Meirelles, P., May 2024, In: Empirical Software Engineering. 29, 3, 62.

Research output: Contribution to journal › Article › peer-review

Injection preparation filtration and health concerns among indigenous people who inject methamphetamine

Anastario, M., Suarez, A., Williamson, O., Firemoon, P., Roberts, E. F. S. & Barber, J., 2024, In: Frontiers in Public Health. 12, 1390210.

Research output: Contribution to journal › Article › peer-review

Open Access

Ladder fuels rather than canopy volumes consistently predict wildfire severity even in extreme topographic-weather conditions

Hakkenberg, C. R., Clark, M. L., Bailey, T., Burns, P. & Goetz, S. J., Dec 2024, In: Communications Earth and Environment. 5, 1, 721.

Research output: Contribution to journal › Article › peer-review

Open Access

Leveraging catchment scale automated novel data collection infrastructure to advance urban hydrologic-hydraulic modeling

Shrestha, A., Garcia, M. & Doerry, E., Jul 2024, In: Environmental Modelling and Software. 178, 106046.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

LiDAR Data Fusion to Improve Forest Attribute Estimates: A Review

Balestra, M., Marselis, S., Sankey, T. T., Cabo, C., Liang, X., Mokroš, M., Peng, X., Singh, A., Stereńczak, K., Vega, C., Vincent, G. & Hollaus, M., Aug 2024, In: Current Forestry Reports. 10, 4, p. 281-297 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

Load Distribution in Reinforced Concrete Slab Span Bridges

Hedegaard, B. D., Dymond, B. Z., Linderman, L. E. & Hill, K. A., Sep 1 2024, In: Journal of Bridge Engineering. 29, 9, 04024065.

Research output: Contribution to journal › Article › peer-review

Mapping the relationship between urban form and CO₂ emissions in three US cities using the Local Climate Zones (LCZ) framework

Javadpoor, M., Sharifi, A. & Gurney, K. R., Nov 2024, In: Journal of Environmental Management. 370, 122723.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

Membrane fluctuations in migrating mesenchymal cells preclude instantaneous velocity definitions

Giardini, G. S. Y., Thomas, G. L., da Cunha, C. R. & de Almeida, R. M. C., Aug 1 2024, In: Physica A: Statistical Mechanics and its Applications. 647, 129915.

Research output: Contribution to journal › Article › peer-review

Mending the Fabric: the Contentious, Collaborative Work of Repairing Broadband Maps

Palacios Abad, B., Belding, E., Vigil-Hayes, M. & Zegura, E., Nov 8 2024, In: Proceedings of the ACM on Human-Computer Interaction. 8, CSCW2, 464.

Research output: Contribution to journal › Article › peer-review

Open Access

Multi-resolution gridded maps of vegetation structure from GEDI

Burns, P., Hakkenberg, C. R. & Goetz, S. J., Dec 2024, In: Scientific Data. 11, 1, 881.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

Newtonian gravitational waves from a continuum

Vadasz, P., May 15 2024, In: Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 480, 2290, 20230656.

Research output: Contribution to journal › Article › peer-review

Open Access

New water accounting reveals why the Colorado River no longer reaches the sea

Richter, B. D., Lamsal, G., Marston, L., Dhakal, S., Sangha, L. S., Rushforth, R. R., Wei, D., Ruddell, B. L., Davis, K. F., Hernandez-Cruz, A., Sandoval-Solis, S. & Schmidt, J. C., Dec 2024, In: Communications Earth and Environment. 5, 1, 134.

Research output: Contribution to journal › Article › peer-review

Open Access

11 Scopus citations

Optimal querying for communication-efficient ADMM using Gaussian process regression

Duarte, A., Nghiem, T. X. & Wei, S., Mar 2024, In: Franklin Open. 6, 100080.

Research output: Contribution to journal › Article › peer-review

Open Access

Permafrost instability negates the positive impact of warming temperatures on boreal radial growth

Alfaro-Sánchez, R., Richardson, A. D., Smith, S. L., Johnstone, J. F., Turetsky, M. R., Cumming, S. G., Le Moine, J. M. & Baltzer, J. L., Dec 10 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 50, e2411721121.

Research output: Contribution to journal › Article › peer-review

Open Access

Phenology Across Scales: An Intercontinental Analysis of Leaf-Out Dates in Temperate Deciduous Tree Communities

Delpierre, N., Garnier, S., Treuil-Dussouet, H., Hufkens, K., Lin, J., Beier, C., Bell, M., Berveiller, D., Cuntz, M., Curioni, G., Dahlin, K., Denham, S. O., Desai, A. R., Domec, J. C., Hart, K. M., Ibrom, A., Joetzjer, E., King, J., Klosterhalfen, A. & Koebsch, F. & 12 others, McHale, P., Morfin, A., Munger, J. W., Noormets, A., Pilegaard, K., Pohl, F., Rebmann, C., Richardson, A. D., Rothstein, D., Schwartz, M. D., Wilkinson, M. & Soudani, K., Dec 2024, In: Global Ecology and Biogeography. 33, 12, e13910.

Research output: Contribution to journal › Article › peer-review

Open Access

Phenology of Photosynthesis in Winter-Dormant Temperate and Boreal Forests: Long-Term Observations From Flux Towers and Quantitative Evaluation of Phenology Models

Bowling, D. R., Schädel, C., Smith, K. R., Richardson, A. D., Bahn, M., Arain, M. A., Varlagin, A., Ouimette, A. P., Frank, J. M., Barr, A. G., Mammarella, I., Šigut, L., Foord, V., Burns, S. P., Montagnani, L., Litvak, M. E., Munger, J. W., Ikawa, H., Hollinger, D. Y. & Blanken, P. D. & 12 others, Ueyama, M., Matteucci, G., Bernhofer, C., Bohrer, G., Iwata, H., Ibrom, A., Pilegaard, K., Spittlehouse, D. L., Kobayashi, H., Desai, A. R., Staebler, R. M. & Black, T. A., May 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 5, e2023JG007839.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

Predicting spring phenology in deciduous broadleaf forests: NEON phenology forecasting community challenge

Wheeler, K. I., Dietze, M. C., LeBauer, D., Peters, J. A., Richardson, A. D., Ross, A. A., Thomas, R. Q., Zhu, K., Bhat, U., Munch, S., Buzbee, R. F., Chen, M., Goldstein, B., Guo, J., Hao, D., Jones, C., Kelly-Fair, M., Liu, H., Malmborg, C. & Neupane, N. & 8 others, Pal, D., Shirey, V., Song, Y., Steen, M., Vance, E. A., Woelmer, W. M., Wynne, J. H. & Zachmann, L., Feb 15 2024, In: Agricultural and Forest Meteorology. 345, 109810.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Reliability Improvement and Effective Switching Layer Model of Thin-Film MoS₂ Memristors

Huang, Y., Gu, Y., Mohan, S., Dolocan, A., Ignacio, N. D., Kutagulla, S., Matthews, K., Londoño-Calderon, A., Chang, Y. F., Chen, Y. C., Warner, J. H., Pettes, M. T., Lee, J. C. & Akinwande, D., Apr 10 2024, In: Advanced Functional Materials. 34, 15, 2214250.

Research output: Contribution to journal › Article › peer-review

Open Access

22 Scopus citations

Satellite Derived Trait Data Slightly Improves Tropical Forest Biomass, NPP and GPP Estimates

Doughty, C. E., Gaillard, C., Burns, P., Malhi, Y., Shenkin, A., Minor, D., Duncanson, L., Aguirre-Gutiérrez, J., Goetz, S. & Tang, H., Jul 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 7, e2024JG008108.

Research output: Contribution to journal › Article › peer-review

Engineering, Steve Sanghi College of

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