Departments, CEIAS

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• EPOCA Svalbard 2010 mesocosm experiment: bacterial community structure

  Roy, A. (Contributor), Gibbons, S. M. (Contributor), Schunck, H. (Contributor), Owens, S. (Contributor), Caporaso, J. G. (Contributor), Sperling, M. (Contributor), Romac, S. (Contributor), Bittner, L. (Contributor), Mühling, M. (Contributor), Riebesell, U. (Contributor), LaRoche, J. (Contributor) & Gilbert, J. A. (Contributor), PANGAEA, Mar 8 2023

  DOI: 10.1594/PANGAEA.833325, https://doi.pangaea.de/10.1594/PANGAEA.833325

  Dataset

• Data from: UAV wildlife radio telemetry: system and methods of localization

  Shafer, M. (Creator), Vega, G. (Creator), Rothfus, K. (Creator) & Flikkema, P. (Creator), DRYAD, Sep 16 2020

  DOI: 10.5061/dryad.qq086mk, https://datadryad.org/stash/dataset/doi:10.5061/dryad.qq086mk

  Dataset

• Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

  Fierer, N. (Creator), Leff, J. W. (Creator), Adams, B. J. (Creator), Nielsen, U. N. (Creator), Bates, S. T. (Creator), Lauber, C. L. (Creator), Owens, S. (Creator), Gilbert, J. A. (Creator), Wall, D. H. (Creator), Caporaso, J. G. (Creator) & Caporaso, J. G. (Creator), DRYAD, May 7 2013

  DOI: 10.5061/dryad.q2n78, https://datadryad.org/stash/dataset/doi:10.5061/dryad.q2n78

  Dataset

• Additional file 4 of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Khoruts, A. (Contributor), Caporaso, J. G. (Contributor), Lipson, K. S. (Contributor), Geis, E. (Contributor), Gregory, A. C. (Contributor), Borody, T. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor), Kang, D. (Contributor), Adams, J. B. (Contributor), Chittick, L. (Contributor), McDonough-Means, S. (Contributor), Sadowsky, M. J. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Fasano, A. (Contributor) & Roux, S. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d4.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d4.v1

  Dataset

• A genomic perspective on the evolutionary diversification of turtles

  Gable, S. M. (Contributor), Byars, M. I. (Contributor), Literman, R. (Contributor) & Tollis, M. (Contributor), Zenodo, 2022

  DOI: 10.5281/zenodo.5808425, https://zenodo.org/record/5808425

  Dataset

• A genomic perspective on the evolutionary diversification of turtles

  Gable, S. (Contributor), Byars, M. (Contributor), Literman, R. (Contributor) & Tollis, M. (Contributor), Zenodo, Jan 21 2022

  DOI: 10.5061/dryad.tdz08kq14, https://zenodo.org/record/5888715

  Dataset

• A genomic perspective on the evolutionary diversification of turtles

  Gable, S. (Contributor), Byars, M. (Contributor), Literman, R. (Contributor) & Tollis, M. (Contributor), Zenodo, Jan 21 2022

  DOI: 10.5281/zenodo.5874763, https://zenodo.org/record/5874763

  Dataset

• Inputs folder contents for DETECT model v1.0

  Ryan, E. (Contributor) & Ogle, K. (Contributor), Zenodo, Sep 22 2017

  DOI: 10.5281/zenodo.926064, https://zenodo.org/record/926064

  Dataset

• Data from: Comparing traditional and Bayesian approaches to ecological meta-analysis

  Pappalardo, P. (Creator), Ogle, K. (Creator), Hamman, E. A. (Creator), Bence, J. R. (Creator), Hungate, B. A. (Creator) & Osenberg, C. W. (Creator), DRYAD, 2020

  DOI: 10.5061/dryad.zw3r22863, https://datadryad.org/stash/dataset/doi:10.5061/dryad.zw3r22863

  Dataset

• Additional file 1: of Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa

  Kaufman, E. L. (Creator), Stone, N. E. (Creator), Scoles, G. A. (Creator), Hepp, C. (Creator), Busch, J. D. (Creator) & Wagner, D. M. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.6289643.v1, https://springernature.figshare.com/articles/Additional_file_1_of_Range-wide_genetic_analysis_of_Dermacentor_variabilis_and_its_Francisella-like_endosymbionts_demonstrates_phylogeographic_concordance_between_both_taxa/6289643/1

  Dataset

• Additional file 4: of Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa

  Kaufman, E. L. (Creator), Stone, N. E. (Creator), Scoles, G. A. (Creator), Hepp, C. (Creator), Busch, J. D. (Creator) & Wagner, D. M. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.6289709.v1, https://springernature.figshare.com/articles/Additional_file_4_of_Range-wide_genetic_analysis_of_Dermacentor_variabilis_and_its_Francisella-like_endosymbionts_demonstrates_phylogeographic_concordance_between_both_taxa/6289709/1

  Dataset

• Additional file 5: of Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa

  Kaufman, E. L. (Creator), Stone, N. E. (Creator), Scoles, G. A. (Creator), Hepp, C. (Creator), Busch, J. D. (Creator) & Wagner, D. M. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.6289724.v1, https://springernature.figshare.com/articles/Additional_file_5_of_Range-wide_genetic_analysis_of_Dermacentor_variabilis_and_its_Francisella-like_endosymbionts_demonstrates_phylogeographic_concordance_between_both_taxa/6289724/1

  Dataset

• Additional file 2: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

  Sookdeo, A. (Creator), Hepp, C. (Creator) & Boissinot, S. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.6061115.v1, https://springernature.figshare.com/articles/Additional_file_2_of_Contrasted_patterns_of_evolution_of_the_LINE-1_retrotransposon_in_perissodactyls_the_history_of_a_LINE-1_extinction/6061115/1

  Dataset

• Additional file 1: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

  Sookdeo, A. (Creator), Hepp, C. (Creator) & Boissinot, S. (Contributor), figshare, 2018

  DOI: 10.6084/m9.figshare.6061103, https://springernature.figshare.com/articles/Additional_file_1_of_Contrasted_patterns_of_evolution_of_the_LINE-1_retrotransposon_in_perissodactyls_the_history_of_a_LINE-1_extinction/6061103

  Dataset

• Additional file 2: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

  Sookdeo, A. (Creator), Hepp, C. (Creator) & Boissinot, S. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.6061115, https://springernature.figshare.com/articles/Additional_file_2_of_Contrasted_patterns_of_evolution_of_the_LINE-1_retrotransposon_in_perissodactyls_the_history_of_a_LINE-1_extinction/6061115

  Dataset

• Plot folder contents for DETECT model v1.0

  Ryan, E. M. (Contributor) & Ogle, K. (Contributor), Zenodo, Sep 22 2017

  DOI: 10.5281/zenodo.927313, https://zenodo.org/record/927313

  Dataset

• Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Kang, D. (Contributor), Adams, J. B. (Creator), Gregory, A. C. (Creator), Borody, T. (Creator), Chittick, L. (Creator), Fasano, A. (Creator), Khoruts, A. (Creator), Geis, E. (Creator), Maldonado, J. (Creator), McDonough-Means, S. (Creator), Pollard, E. L. (Creator), Roux, S. (Creator), Sadowsky, M. J. (Creator), Lipson, K. S. (Creator), Sullivan, M. B. (Creator), Caporaso, J. G. (Contributor), Krajmalnik-Brown, R. (Creator) & Sullivan, M. (Creator), figshare Academic Research System, 2017

  DOI: 10.6084/m9.figshare.c.3674866.v1, https://figshare.com/collections/Microbiota_Transfer_Therapy_alters_gut_ecosystem_and_improves_gastrointestinal_and_autism_symptoms_an_open-label_study/3674866/1

  Dataset

• ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses

  Fouquier, J. (Creator), Rideout, J. R. (Creator), Bolyen, E. (Creator), Chase, J. (Creator), Shiffer, A. (Creator), McDonald, D. (Creator), Knight, R. (Creator), Caporaso, J. G. (Contributor) & Kelley, S. T. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3641909.v1, https://figshare.com/collections/ghost-tree_creating_hybrid-gene_phylogenetic_trees_for_diversity_analyses/3641909/1

  Dataset

• ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses

  Fouquier, J. (Creator), Rideout, J. R. (Creator), Bolyen, E. (Creator), Chase, J. (Creator), Shiffer, A. (Creator), McDonald, D. (Creator), Knight, R. (Creator), Caporaso, J. G. (Contributor) & Kelley, S. T. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3641909, https://figshare.com/collections/ghost-tree_creating_hybrid-gene_phylogenetic_trees_for_diversity_analyses/3641909

  Dataset

• Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

  Fierer, N. (Contributor), Leff, J. W. (Contributor), Adams, B. J. (Contributor), Nielsen, U. N. (Contributor), Bates, S. T. (Contributor), Lauber, C. L. (Contributor), Owens, S. (Contributor), Gilbert, J. A. (Contributor), Wall, D. H. (Contributor), Caporaso, J. G. (Contributor) & Caporaso, J. G. (Contributor), Zenodo, May 7 2013

  DOI: 10.5061/dryad.q2n78, https://zenodo.org/record/4954226

  Dataset

• Linear time dynamic programming for computing breakpoints in the regularization path of models selected from a finite set

  Vargovich, J. (Creator) & Hocking, T. (Creator), Taylor & Francis, 2021

  DOI: 10.6084/m9.figshare.17014513.v1, https://tandf.figshare.com/articles/dataset/Linear_time_dynamic_programming_for_computing_breakpoints_in_the_regularization_path_of_models_selected_from_a_finite_set/17014513/1

  Dataset

• Fungal infection alters the selection, dispersal, and drift processes structuring the amphibian skin microbiome

  Wilber, M. Q. (Creator), Jani, A. J. (Creator), Mihaljevic, J. (Creator) & Briggs, C. J. (Creator), UC Santa Barbara, Nov 19 2019

  DOI: 10.25349/d9p88j, https://datadryad.org/stash/dataset/doi:10.25349/D9P88J

  Dataset

• Data from: Parasite metacommunities: evaluating the roles of host community composition and environmental gradients in structuring symbiont communities within amphibians

  Mihaljevic, J. (Creator), Hoye, B. J. (Creator) & Johnson, P. T. J. (Creator), DRYAD, Jul 7 2018

  DOI: 10.5061/dryad.mf202, https://datadryad.org/stash/dataset/doi:10.5061/dryad.mf202

  Dataset

• Fungal infection alters the selection, dispersal, and drift processes structuring the amphibian skin microbiome

  Wilber, M. Q. (Contributor), Jani, A. J. (Contributor), Mihaljevic, J. (Contributor) & Briggs, C. J. (Contributor), Zenodo, 2019

  DOI: 10.25349/D9P88J, https://zenodo.org/record/5004758

  Dataset

• MOESM4 of What to expect, and how to improve online discussion forums: the instructors’ perspective

  de Lima, D. P. R. (Contributor), Gerosa, M. (Creator), Conte, T. U. (Contributor) & de M. Netto, J. F. (Contributor), figshare, 2019

  DOI: 10.6084/m9.figshare.11315912, https://springernature.figshare.com/articles/MOESM4_of_What_to_expect_and_how_to_improve_online_discussion_forums_the_instructors_perspective/11315912

  Dataset