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• Additional file 1: Figure S1. of ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses

  Caporaso, J. G. (Contributor), Rideout, J. R. (Contributor), Shiffer, A. (Contributor), McDonald, D. (Contributor), Kelley, S. T. (Contributor), Bolyen, E. (Contributor), Knight, R. (Contributor), Chase, J. (Contributor) & Fouquier, J. (Contributor), figshare Academic Research System, Jan 1 2016

  DOI: 10.6084/m9.figshare.c.3641909_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3641909_d1.v1

  Dataset

• Additional file 1: of Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

  Ternus, K. L. (Contributor), Uritskiy, G. (Contributor), Cepeda-Espinoza, V. (Contributor), Rogers, S. M. (Contributor), Hasan, N. A. (Contributor), Brown, A. (Contributor), Schliebs, N. O. (Contributor), Nasko, D. J. (Contributor), Ondov, B. D. (Contributor), Zhang, S. X. (Contributor), Fedarko, M. (Contributor), Olson, N. D. (Contributor), Javkar, K. (Contributor), Conlan, S. (Contributor), Preheim, S. (Contributor), Ratnayake, S. (Contributor), Chopyk, J. (Contributor), Pop, M. (Contributor), Corrada-Bravo, H. (Contributor), Rosovitz, M. J. (Contributor), Forry, S. P. (Contributor), Diruggiero, J. (Contributor), Brubach, B. (Contributor), Bergman, N. H. (Contributor), Kralj, J. (Contributor), Treangen, T. J. (Contributor), Meisel, J. S. (Contributor), Allard, S. M. (Contributor), Luethy, P. M. (Contributor), Milton, D. K. (Contributor), Caporaso, J. G. (Contributor), Shah, N. (Contributor), Bazinet, A. L. (Contributor), Sommer, D. D. (Contributor), Sakowski, E. G. (Contributor) & Ghurye, J. (Contributor), figshare Academic Research System, Nov 5 2018

  DOI: 10.6084/m9.figshare.7300967.v1, https://doi.org/10.6084%2Fm9.figshare.7300967.v1

  Dataset

• Additional file 1: Table S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Geis, E. (Contributor), Fasano, A. (Contributor), Khoruts, A. (Contributor), Sadowsky, M. J. (Contributor), Caporaso, J. G. (Contributor), Lipson, K. S. (Contributor), McDonough-Means, S. (Contributor), Adams, J. B. (Contributor), Chittick, L. (Contributor), Borody, T. (Contributor), Gregory, A. C. (Contributor), Kang, D. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor) & Roux, S. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d3.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d3.v1

  Dataset

• Additional file 1 of Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models

  Rigaill, G. (Creator), Hocking, T. (Creator) & Liehrmann, A. (Creator), figshare, 2021

  DOI: 10.6084/m9.figshare.14782689.v1, https://doi.org/10.6084%2Fm9.figshare.14782689.v1

  Dataset

• Additional file 1 of Leptospira in river and soil in a highly endemic area of Ecuador

  Nieto, N. (Contributor), Marks, J. (Contributor), Jiménez, D. J. (Contributor), Caporaso, J. G. (Contributor), Barragan, V. (Contributor), Miller, E. (Contributor), Weddell, C. (Contributor), Mihaljevic, J. R. (Contributor), Olivas, S. (Contributor), Aleman, J. (Contributor), Luna, L. (Contributor), Izurieta, R. (Contributor), Keim, P. (Contributor), Trueba, G. (Contributor), Pearson, T. (Contributor) & Chiriboga, J. (Contributor), figshare Academic Research System, Jan 1 2021

  DOI: 10.6084/m9.figshare.13543912.v1, https://doi.org/10.6084%2Fm9.figshare.13543912.v1

  Dataset

• Additional file 2: Dataset S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Chittick, L. (Contributor), Khoruts, A. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Roux, S. (Contributor), Pollard, E. L. (Contributor), Sadowsky, M. J. (Contributor), Geis, E. (Contributor), Borody, T. (Contributor), Gregory, A. C. (Contributor), Adams, J. B. (Contributor), Sullivan, M. B. (Contributor), McDonough-Means, S. (Contributor), Fasano, A. (Contributor), Lipson, K. S. (Contributor), Caporaso, J. G. (Contributor) & Kang, D. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d2.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d2.v1

  Dataset

• Additional file 2 of Leptospira in river and soil in a highly endemic area of Ecuador

  Caporaso, J. G. (Contributor), Pearson, T. (Contributor), Jiménez, D. J. (Contributor), Trueba, G. (Contributor), Chiriboga, J. (Contributor), Izurieta, R. (Contributor), Barragan, V. (Contributor), Weddell, C. (Contributor), Aleman, J. (Contributor), Luna, L. (Contributor), Nieto, N. (Contributor), Olivas, S. (Contributor), Marks, J. (Contributor), Miller, E. (Contributor), Keim, P. (Contributor) & Mihaljevic, J. R. (Contributor), figshare Academic Research System, Jan 1 2021

  DOI: 10.6084/m9.figshare.13543915.v1, https://doi.org/10.6084%2Fm9.figshare.13543915.v1

  Dataset

• Additional file 3: Figure S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Sadowsky, M. J. (Contributor), Borody, T. (Contributor), Caporaso, J. G. (Contributor), Krajmalnik-Brown, R. (Contributor), Geis, E. (Contributor), Khoruts, A. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor), Kang, D. (Contributor), McDonough-Means, S. (Contributor), Lipson, K. S. (Contributor), Roux, S. (Contributor), Gregory, A. C. (Contributor), Fasano, A. (Contributor), Adams, J. B. (Contributor), Maldonado, J. (Contributor) & Chittick, L. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d5.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d5.v1

  Dataset

• Additional file 3 of Leptospira in river and soil in a highly endemic area of Ecuador

  Barragan, V. (Contributor), Marks, J. (Contributor), Chiriboga, J. (Contributor), Miller, E. (Contributor), Weddell, C. (Contributor), Mihaljevic, J. R. (Contributor), Luna, L. (Contributor), Caporaso, J. G. (Contributor), Jiménez, D. J. (Contributor), Pearson, T. (Contributor), Nieto, N. (Contributor), Olivas, S. (Contributor), Aleman, J. (Contributor), Izurieta, R. (Contributor), Trueba, G. (Contributor) & Keim, P. (Contributor), figshare Academic Research System, Jan 1 2021

  DOI: 10.6084/m9.figshare.13543921.v1, https://doi.org/10.6084%2Fm9.figshare.13543921.v1

  Dataset

• Additional file 4 of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Khoruts, A. (Contributor), Caporaso, J. G. (Contributor), Lipson, K. S. (Contributor), Geis, E. (Contributor), Gregory, A. C. (Contributor), Borody, T. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor), Kang, D. (Contributor), Adams, J. B. (Contributor), Chittick, L. (Contributor), McDonough-Means, S. (Contributor), Sadowsky, M. J. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Fasano, A. (Contributor) & Roux, S. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d4.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d4.v1

  Dataset

• Additional file 5: Dataset S2. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

  Sadowsky, M. J. (Contributor), Maldonado, J. (Contributor), McDonough-Means, S. (Contributor), Lipson, K. S. (Contributor), Krajmalnik-Brown, R. (Contributor), Kang, D. (Contributor), Roux, S. (Contributor), Chittick, L. (Contributor), Caporaso, J. G. (Contributor), Fasano, A. (Contributor), Gregory, A. C. (Contributor), Adams, J. B. (Contributor), Geis, E. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor), Khoruts, A. (Contributor) & Borody, T. (Contributor), figshare Academic Research System, Jan 1 2017

  DOI: 10.6084/m9.figshare.c.3674866_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d1.v1

  Dataset

• Appendix A. Tables and figures providing statistical support including representation of the differences between the regional and site level protocols and of model bias, correlation, and variability statistics.

  Raczka, B. M. (Creator), Huntzinger, D. (Creator), Neilson, R. P. (Creator), Davis, K. J. (Creator), Tian, H. (Contributor), Poulter, B. (Creator), Richardson, A. (Creator), Keenan, T. F. (Creator), Baker, I. (Creator), Schaefer, K. (Creator), Verbeeck, H. (Creator), Tomelleri, E. (Creator), Viovy, N. (Creator), Ricciuto, D. (Creator), Ciais, P. (Creator), Post, W. M. (Creator), Xiao, J. (Contributor) & Law, B. (Creator), wiley, 2016

  DOI: 10.6084/m9.figshare.3568323.v1, https://doi.org/10.6084%2Fm9.figshare.3568323.v1

  Dataset

• Appendix B. Tables and figures providing a statistical representation of the observed flux tower carbon fluxes grouped by the plant function type of the site locations.

  Baker, I. (Creator), Davis, K. J. (Creator), Ciais, P. (Creator), Schaefer, K. (Creator), Tomelleri, E. (Creator), Verbeeck, H. (Creator), Viovy, N. (Creator), Richardson, A. (Creator), Neilson, R. P. (Creator), Tian, H. (Contributor), Keenan, T. F. (Creator), Ricciuto, D. (Creator), Poulter, B. (Creator), Raczka, B. M. (Creator), Law, B. (Creator), Huntzinger, D. (Creator), Xiao, J. (Contributor) & Post, W. M. (Creator), wiley, 2016

  DOI: 10.6084/m9.figshare.3568320.v1, https://doi.org/10.6084%2Fm9.figshare.3568320.v1

  Dataset

• Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

  Sookdeo, A. (Creator), Hepp, C. (Creator) & Boissinot, S. (Contributor), figshare Academic Research System, 2018

  DOI: https://doi.org/10.6084/m9.figshare.c.4052195.v1, https://doi.org/10.6084%2Fm9.figshare.c.4052195.v1

  Dataset

• Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

  Meisel, J. S. (Creator), Nasko, D. J. (Creator), Brubach, B. (Creator), Cepeda-Espinoza, V. (Creator), Chopyk, J. (Creator), Corrada-Bravo, H. (Contributor), Fedarko, M. (Creator), Ghurye, J. (Creator), Javkar, K. (Creator), Olson, N. D. (Creator), Shah, N. (Creator), Allard, S. M. (Creator), Bazinet, A. L. (Creator), Bergman, N. H. (Creator), Brown, A. (Creator), Caporaso, J. G. (Contributor), Conlan, S. (Creator), Diruggiero, J. (Contributor), Forry, S. P. (Creator), Hasan, N. A. (Creator), Kralj, J. (Creator), Luethy, P. M. (Creator), Milton, D. K. (Creator), Ondov, B. D. (Creator), Preheim, S. (Creator), Ratnayake, S. (Contributor), Rogers, S. M. (Creator), Rosovitz, M. J. (Contributor), Sakowski, E. G. (Creator), Schliebs, N. O. (Creator), Sommer, D. D. (Creator), Ternus, K. L. (Creator), Uritskiy, G. (Contributor), Zhang, S. X. (Creator), Pop, M. (Creator) & Treangen, T. J. (Creator), figshare Academic Research System, 2018

  DOI: https://doi.org/10.6084/m9.figshare.c.4291514.v1, https://doi.org/10.6084%2Fm9.figshare.c.4291514.v1

  Dataset

• Data for: Development of a PEO-based lithium ion conductive epoxy resin polymer electrolyte

  Lindberg, G. E. (Contributor), Browder, C. C. (Contributor), Cook, J. (Contributor), Marsh, P. (Contributor), Liebig, A. (Contributor), Ciocanel, C. (Contributor) & Andrews, W. T. (Contributor), Mendeley Data, Oct 13 2018

  DOI: 10.17632/dvprjvngzf.1, https://data.mendeley.com/datasets/dvprjvngzf

  Dataset

• Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

  Fierer, N. (Contributor), Adams, B. J. (Contributor), Nielsen, U. N. (Contributor), Bates, S. T. (Contributor), Owens, S. (Contributor), Lauber, C. L. (Contributor), Leff, J. W. (Contributor), Wall, D. H. (Contributor), Gilbert, J. A. (Contributor) & Caporaso, J. G. (Contributor), DRYAD, Dec 26 2012

  DOI: 10.5061/dryad.q2n78, http://datadryad.org/stash/dataset/doi:10.5061/dryad.q2n78

  Dataset

• Data from: Major Histocompatibility Complex class IIb polymorphism influences gut microbiota composition and diversity

  Lauber, C. (Contributor), Stutz, W. E. (Contributor), Snowberg, L. K. (Contributor), Knight, R. (Contributor), Bolnick, D. I. (Contributor) & Caporaso, J. G. (Contributor), DRYAD, Oct 1 2014

  DOI: 10.5061/dryad.2s07s, http://datadryad.org/stash/dataset/doi:10.5061/dryad.2s07s

  Dataset

• Effects of Adopting Code Review Bots on Pull Requests to OSS Projects

  Wessel, M. (Contributor) & Gerosa, M. (Contributor), Zenodo, 2020

  DOI: 10.5281/zenodo.4011431, https://zenodo.org/record/4011431

  Dataset

• EPOCA Svalbard 2010 mesocosm experiment: bacterial community structure

  Roy, A. (Contributor), Gibbons, S. M. (Contributor), Schunck, H. (Contributor), Owens, S. (Contributor), Caporaso, J. G. (Contributor), Sperling, M. (Contributor), Romac, S. (Contributor), Bittner, L. (Contributor), M?hling, M. (Contributor), Riebesell, U. (Contributor), LaRoche, J. (Contributor) & Gilbert, J. A. (Contributor), PANGAEA, 2013

  DOI: 10.1594/PANGAEA.833325, https://doi.pangaea.de/10.1594/PANGAEA.833325

  Dataset

• Evaluation of continental carbon cycle simulations with North American flux tower observations

  Verbeeck, H. (Creator), Keenan, T. F. (Creator), Schaefer, K. (Creator), Richardson, A. (Creator), Baker, I. (Creator), Post, W. M. (Creator), Poulter, B. (Creator), Huntzinger, D. (Creator), Law, B. (Creator), Davis, K. J. (Creator), Xiao, J. (Contributor), Tian, H. (Contributor), Raczka, B. M. (Creator), Viovy, N. (Creator), Tomelleri, E. (Creator), Ricciuto, D. (Creator), Neilson, R. P. (Creator) & Ciais, P. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3309804.v1, https://doi.org/10.6084%2Fm9.figshare.c.3309804.v1

  Dataset

• Fungal infection alters the selection, dispersal, and drift processes structuring the amphibian skin microbiome

  Wilber, M. Q. (Contributor), Jani, A. J. (Contributor), Mihaljevic, J. (Contributor) & Briggs, C. J. (Contributor), Zenodo, 2019

  DOI: 10.25349/D9P88J, https://zenodo.org/record/5004758

  Dataset

• ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses

  Shiffer, A. (Contributor), Kelley, S. T. (Contributor), Bolyen, E. (Contributor), Fouquier, J. (Contributor), Rideout, J. R. (Contributor), Caporaso, J. G. (Contributor), McDonald, D. (Contributor), Chase, J. (Contributor) & Knight, R. (Contributor), figshare Academic Research System, Jan 1 2016

  DOI: 10.6084/m9.figshare.c.3641909.v1, https://doi.org/10.6084%2Fm9.figshare.c.3641909.v1

  Dataset

• Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models

  Liehrmann, A. (Creator), Hocking, T. (Creator) & Rigaill, G. (Creator), figshare, 2021

  DOI: 10.6084/m9.figshare.c.5467308.v1, https://doi.org/10.6084%2Fm9.figshare.c.5467308.v1

  Dataset

• Is robotic gait training effective for individuals with cerebral palsy? A systematic review and meta-analysis of randomized controlled trials

  Conner, B. C. (Creator), Remec, N. M. (Creator) & Lerner, Z. (Creator), SAGE Journals, 2022

  DOI: 10.25384/sage.c.5916503.v1, https://sage.figshare.com/collections/Is_robotic_gait_training_effective_for_individuals_with_cerebral_palsy_A_systematic_review_and_meta-analysis_of_randomized_controlled_trials/5916503/1

  Dataset