Datasets
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Appendix B. Tables and figures providing a statistical representation of the observed flux tower carbon fluxes grouped by the plant function type of the site locations.
Baker, I. (Creator), Davis, K. J. (Creator), Ciais, P. (Creator), Schaefer, K. (Creator), Tomelleri, E. (Creator), Verbeeck, H. (Creator), Viovy, N. (Creator), Richardson, A. (Creator), Neilson, R. P. (Creator), Tian, H. (Contributor), Keenan, T. F. (Creator), Ricciuto, D. (Creator), Poulter, B. (Creator), Raczka, B. M. (Creator), Law, B. (Creator), Huntzinger, D. (Creator), Xiao, J. (Contributor) & Post, W. M. (Creator), wiley, 2016
DOI: 10.6084/m9.figshare.3568320.v1, https://doi.org/10.6084%2Fm9.figshare.3568320.v1
Dataset
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Additional file 1 of Leptospira in river and soil in a highly endemic area of Ecuador
Nieto, N. (Contributor), Marks, J. (Contributor), Jiménez, D. J. (Contributor), Caporaso, J. G. (Contributor), Barragan, V. (Contributor), Miller, E. (Contributor), Weddell, C. (Contributor), Mihaljevic, J. R. (Contributor), Olivas, S. (Contributor), Aleman, J. (Contributor), Luna, L. (Contributor), Izurieta, R. (Contributor), Keim, P. (Contributor), Trueba, G. (Contributor), Pearson, T. (Contributor) & Chiriboga, J. (Contributor), figshare Academic Research System, Jan 1 2021
DOI: 10.6084/m9.figshare.13543912.v1, https://doi.org/10.6084%2Fm9.figshare.13543912.v1
Dataset
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Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018
Meisel, J. S. (Creator), Nasko, D. J. (Creator), Brubach, B. (Creator), Cepeda-Espinoza, V. (Creator), Chopyk, J. (Creator), Corrada-Bravo, H. (Contributor), Fedarko, M. (Creator), Ghurye, J. (Creator), Javkar, K. (Creator), Olson, N. D. (Creator), Shah, N. (Creator), Allard, S. M. (Creator), Bazinet, A. L. (Creator), Bergman, N. H. (Creator), Brown, A. (Creator), Caporaso, J. G. (Contributor), Conlan, S. (Creator), Diruggiero, J. (Contributor), Forry, S. P. (Creator), Hasan, N. A. (Creator), Kralj, J. (Creator), Luethy, P. M. (Creator), Milton, D. K. (Creator), Ondov, B. D. (Creator), Preheim, S. (Creator), Ratnayake, S. (Contributor), Rogers, S. M. (Creator), Rosovitz, M. J. (Contributor), Sakowski, E. G. (Creator), Schliebs, N. O. (Creator), Sommer, D. D. (Creator), Ternus, K. L. (Creator), Uritskiy, G. (Contributor), Zhang, S. X. (Creator), Pop, M. (Creator) & Treangen, T. J. (Creator), figshare Academic Research System, 2018
DOI: https://doi.org/10.6084/m9.figshare.c.4291514.v1, https://doi.org/10.6084%2Fm9.figshare.c.4291514.v1
Dataset
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Data for: Development of a PEO-based lithium ion conductive epoxy resin polymer electrolyte
Lindberg, G. E. (Contributor), Browder, C. C. (Contributor), Cook, J. (Contributor), Marsh, P. (Contributor), Liebig, A. (Contributor), Ciocanel, C. (Contributor) & Andrews, W. T. (Contributor), Mendeley Data, Oct 13 2018
DOI: 10.17632/dvprjvngzf.1, https://data.mendeley.com/datasets/dvprjvngzf
Dataset
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Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models
Liehrmann, A. (Creator), Hocking, T. (Creator) & Rigaill, G. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.c.5467308.v1, https://doi.org/10.6084%2Fm9.figshare.c.5467308.v1
Dataset
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Resonantly enhanced nonreciprocal silicon Brillouin amplifier
Otterstrom, N. T. (Creator), Kittlaus, E. A. (Creator), Gertler, S. (Creator), Behunin, R. (Creator), Lentine, A. L. (Creator) & Rakich, P. T. (Creator), The Optical Society, 2019
DOI: https://doi.org/10.6084/m9.figshare.c.4427906.v1, https://doi.org/10.6084%2Fm9.figshare.c.4427906.v1
Dataset
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Additional file 1 of Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models
Rigaill, G. (Creator), Hocking, T. (Creator) & Liehrmann, A. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.14782689.v1, https://doi.org/10.6084%2Fm9.figshare.14782689.v1
Dataset
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Additional file 1: Table S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
Geis, E. (Contributor), Fasano, A. (Contributor), Khoruts, A. (Contributor), Sadowsky, M. J. (Contributor), Caporaso, J. G. (Contributor), Lipson, K. S. (Contributor), McDonough-Means, S. (Contributor), Adams, J. B. (Contributor), Chittick, L. (Contributor), Borody, T. (Contributor), Gregory, A. C. (Contributor), Kang, D. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Pollard, E. L. (Contributor), Sullivan, M. B. (Contributor) & Roux, S. (Contributor), figshare Academic Research System, Jan 1 2017
DOI: 10.6084/m9.figshare.c.3674866_d3.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d3.v1
Dataset
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Effects of Adopting Code Review Bots on Pull Requests to OSS Projects
Wessel, M. (Contributor) & Gerosa, M. (Contributor), Zenodo, 2020
DOI: 10.5281/zenodo.4011431, https://zenodo.org/record/4011431
Dataset
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Survival regression with accelerated failure time model in XGBoost
Barnwal, A. (Creator), Cho, H. (Creator) & Hocking, T. (Creator), Taylor & Francis, 2022
DOI: 10.6084/m9.figshare.19651403.v1, https://tandf.figshare.com/articles/dataset/Survival_regression_with_accelerated_failure_time_model_in_XGBoost/19651403/1
Dataset
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EPOCA Svalbard 2010 mesocosm experiment: bacterial community structure
Roy, A. (Contributor), Gibbons, S. M. (Contributor), Schunck, H. (Contributor), Owens, S. (Contributor), Caporaso, J. G. (Contributor), Sperling, M. (Contributor), Romac, S. (Contributor), Bittner, L. (Contributor), M?hling, M. (Contributor), Riebesell, U. (Contributor), LaRoche, J. (Contributor) & Gilbert, J. A. (Contributor), PANGAEA, 2013
DOI: 10.1594/PANGAEA.833325, https://doi.pangaea.de/10.1594/PANGAEA.833325
Dataset
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Species abundance information improves sequence taxonomy classification accuracy - Qiita data
Kaehler, B. D. (Contributor), Huttley, G. A. (Contributor), McDonald, D. (Contributor), Knight, R. (Contributor), Gregory Caporaso, C. J. (Contributor) & Bokulich, N. A. (Contributor), Zenodo, Jan 25 2019
DOI: 10.5281/zenodo.2548899, https://zenodo.org/record/2548899
Dataset
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Data from: Major Histocompatibility Complex class IIb polymorphism influences gut microbiota composition and diversity
Lauber, C. (Contributor), Stutz, W. E. (Contributor), Snowberg, L. K. (Contributor), Knight, R. (Contributor), Bolnick, D. I. (Contributor) & Caporaso, J. G. (Contributor), DRYAD, Oct 1 2014
DOI: 10.5061/dryad.2s07s, http://datadryad.org/stash/dataset/doi:10.5061/dryad.2s07s
Dataset
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Species abundance information improves sequence taxonomy classification accuracy - HMP and NCBI data
Knight, R. (Contributor), Bokulich, N. A. (Contributor), Kaehler, B. D. (Contributor), McDonald, D. (Contributor), Gregory Caporaso, C. J. (Contributor) & Huttley, G. A. (Contributor), Zenodo, Jan 26 2019
DOI: 10.5281/zenodo.2549777, https://zenodo.org/record/2549777
Dataset
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Additional file 1: Figure S1. of ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses
Caporaso, J. G. (Contributor), Rideout, J. R. (Contributor), Shiffer, A. (Contributor), McDonald, D. (Contributor), Kelley, S. T. (Contributor), Bolyen, E. (Contributor), Knight, R. (Contributor), Chase, J. (Contributor) & Fouquier, J. (Contributor), figshare Academic Research System, Jan 1 2016
DOI: 10.6084/m9.figshare.c.3641909_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3641909_d1.v1
Dataset
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Supporting data for "Keemei: cloud-based validation of tabular bioinformatics file formats in Google Sheets"
González, A. (Contributor), Rideout, J. R. (Contributor), Chase, J. H. (Contributor), Caporaso, G. (Contributor), Ackermann, G. (Contributor), Knight, R. (Contributor) & Bolyen, E. (Contributor), GigaDB, Jan 1 2015
DOI: 10.5524/100204, https://doi.org/10.5524%2F100204
Dataset
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Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
Fierer, N. (Contributor), Adams, B. J. (Contributor), Nielsen, U. N. (Contributor), Bates, S. T. (Contributor), Owens, S. (Contributor), Lauber, C. L. (Contributor), Leff, J. W. (Contributor), Wall, D. H. (Contributor), Gilbert, J. A. (Contributor) & Caporaso, J. G. (Contributor), DRYAD, Dec 26 2012
DOI: 10.5061/dryad.q2n78, http://datadryad.org/stash/dataset/doi:10.5061/dryad.q2n78
Dataset
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Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction
Sookdeo, A. (Creator), Hepp, C. (Creator) & Boissinot, S. (Contributor), figshare Academic Research System, 2018
DOI: https://doi.org/10.6084/m9.figshare.c.4052195.v1, https://doi.org/10.6084%2Fm9.figshare.c.4052195.v1
Dataset
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Supplementary material from "Accounting for residence-time in blood rheology models: do we really need non-Newtonian blood flow modelling in large arteries?"
Arzani, A. (Contributor), figshare Academic Research System, 2018
DOI: https://doi.org/10.6084/m9.figshare.c.4226417.v1, https://doi.org/10.6084%2Fm9.figshare.c.4226417.v1
Dataset
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Additional file 2: Dataset S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
Chittick, L. (Contributor), Khoruts, A. (Contributor), Maldonado, J. (Contributor), Krajmalnik-Brown, R. (Contributor), Roux, S. (Contributor), Pollard, E. L. (Contributor), Sadowsky, M. J. (Contributor), Geis, E. (Contributor), Borody, T. (Contributor), Gregory, A. C. (Contributor), Adams, J. B. (Contributor), Sullivan, M. B. (Contributor), McDonough-Means, S. (Contributor), Fasano, A. (Contributor), Lipson, K. S. (Contributor), Caporaso, J. G. (Contributor) & Kang, D. (Contributor), figshare Academic Research System, Jan 1 2017
DOI: 10.6084/m9.figshare.c.3674866_d2.v1, https://doi.org/10.6084%2Fm9.figshare.c.3674866_d2.v1
Dataset
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Is robotic gait training effective for individuals with cerebral palsy? A systematic review and meta-analysis of randomized controlled trials
Conner, B. C. (Creator), Remec, N. M. (Creator) & Lerner, Z. (Creator), SAGE Journals, 2022
DOI: 10.25384/sage.c.5916503.v2, https://sage.figshare.com/collections/Is_robotic_gait_training_effective_for_individuals_with_cerebral_palsy_A_systematic_review_and_meta-analysis_of_randomized_controlled_trials/5916503/2
Dataset
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Plot folder contents for DETECT model v1.0
Ryan, E. M. (Contributor) & Ogle, K. (Contributor), Zenodo, 2017
DOI: 10.5281/zenodo.927313, https://zenodo.org/record/927313
Dataset
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Evaluation of continental carbon cycle simulations with North American flux tower observations
Verbeeck, H. (Creator), Keenan, T. F. (Creator), Schaefer, K. (Creator), Richardson, A. (Creator), Baker, I. (Creator), Post, W. M. (Creator), Poulter, B. (Creator), Huntzinger, D. (Creator), Law, B. (Creator), Davis, K. J. (Creator), Xiao, J. (Contributor), Tian, H. (Contributor), Raczka, B. M. (Creator), Viovy, N. (Creator), Tomelleri, E. (Creator), Ricciuto, D. (Creator), Neilson, R. P. (Creator) & Ciais, P. (Creator), figshare, 2016
DOI: 10.6084/m9.figshare.c.3309804.v1, https://doi.org/10.6084%2Fm9.figshare.c.3309804.v1
Dataset
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Leptospira in river and soil in a highly endemic area of Ecuador
Jiménez, D. J. (Contributor), Mihaljevic, J. R. (Contributor), Izurieta, R. (Contributor), Miller, E. (Contributor), Trueba, G. (Contributor), Weddell, C. (Contributor), Nieto, N. (Contributor), Aleman, J. (Contributor), Luna, L. (Contributor), Chiriboga, J. (Contributor), Barragan, V. (Contributor), Pearson, T. (Contributor), Keim, P. (Contributor), Marks, J. (Contributor), Olivas, S. (Contributor) & Caporaso, J. G. (Contributor), figshare Academic Research System, Jan 1 2021
DOI: 10.6084/m9.figshare.c.5261254.v1, https://doi.org/10.6084%2Fm9.figshare.c.5261254.v1
Dataset
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Additional file 1: of Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018
Ternus, K. L. (Contributor), Uritskiy, G. (Contributor), Cepeda-Espinoza, V. (Contributor), Rogers, S. M. (Contributor), Hasan, N. A. (Contributor), Brown, A. (Contributor), Schliebs, N. O. (Contributor), Nasko, D. J. (Contributor), Ondov, B. D. (Contributor), Zhang, S. X. (Contributor), Fedarko, M. (Contributor), Olson, N. D. (Contributor), Javkar, K. (Contributor), Conlan, S. (Contributor), Preheim, S. (Contributor), Ratnayake, S. (Contributor), Chopyk, J. (Contributor), Pop, M. (Contributor), Corrada-Bravo, H. (Contributor), Rosovitz, M. J. (Contributor), Forry, S. P. (Contributor), Diruggiero, J. (Contributor), Brubach, B. (Contributor), Bergman, N. H. (Contributor), Kralj, J. (Contributor), Treangen, T. J. (Contributor), Meisel, J. S. (Contributor), Allard, S. M. (Contributor), Luethy, P. M. (Contributor), Milton, D. K. (Contributor), Caporaso, J. G. (Contributor), Shah, N. (Contributor), Bazinet, A. L. (Contributor), Sommer, D. D. (Contributor), Sakowski, E. G. (Contributor) & Ghurye, J. (Contributor), figshare Academic Research System, Nov 5 2018
DOI: 10.6084/m9.figshare.7300967.v1, https://doi.org/10.6084%2Fm9.figshare.7300967.v1
Dataset