Biological Sciences

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• PLANT GENES LINK FORESTS AND STREAMS

  LeRoy, C. J. (Creator), Whitham, T. G. (Creator), Keim, P. (Creator) & Marks, J. C. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3298964.v1, https://figshare.com/collections/PLANT_GENES_LINK_FORESTS_AND_STREAMS/3298964/1

  Dataset

• Home-field advantage? evidence of local adaptation among plants, soil, and arbuscular mycorrhizal fungi through meta-analysis

  Rúa, M. A. (Contributor), Antoninka, A. (Creator), Antunes, P. M. (Creator), Chaudhary, V. B. (Contributor), Gehring, C. (Creator), Lamit, L. J. (Creator), Piculell, B. J. (Creator), Bever, J. D. (Creator), Zabinski, C. (Creator), Meadow, J. F. (Creator), Lajeunesse, M. J. (Creator), Milligan, B. G. (Creator), Karst, J. (Creator) & Hoeksema, J. D. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3600869.v1, https://figshare.com/collections/Home-field_advantage_evidence_of_local_adaptation_among_plants_soil_and_arbuscular_mycorrhizal_fungi_through_meta-analysis/3600869/1

  Dataset

• Sinks for nitrogen inputs in terrestrial ecosystems: a meta-analysis of 15N tracer field studies

  Templer, P. H. (Contributor), Mack, M. C. (Contributor), Chapin, I. F. S. (Contributor), Christenson, L. M. (Contributor), Compton, J. E. (Contributor), Crook, H. D. (Contributor), Currie, W. S. (Contributor), Curtis, C. J. (Contributor), Dail, D. B. (Contributor), D'Antonio, C. M. (Contributor), Emmett, B. A. (Contributor), Epstein, H. E. (Contributor), Goodale, C. L. (Contributor), Gundersen, P. (Contributor), Hobbie, S. E. (Contributor), Holland, K. (Contributor), Hooper, D. U. (Contributor), Hungate, B. A. (Contributor), Lamontagne, S. (Contributor), Nadelhoffer, K. J. (Contributor), Osenberg, C. W. (Contributor), Perakis, S. S. (Contributor), Schleppi, P. (Contributor), Schimel, J. (Contributor), Schmidt, I. K. (Contributor), Sommerkorn, M. (Contributor), Spoelstra, J. (Contributor), Tietema, A. (Contributor), Wessel, W. W. (Contributor) & Zak, D. R. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3304863, https://figshare.com/collections/Sinks_for_nitrogen_inputs_in_terrestrial_ecosystems_a_meta-analysis_of_sup_15_sup_N_tracer_field_studies/3304863

  Dataset

• Appendix B. A table of feeding behaviors used by morphotypes of Herichthys minckleyi.

  Swanson, B. O. (Creator), Gibb, A. C. (Creator), Marks, J. C. (Creator) & Hendrickson, D. A. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3522695, https://wiley.figshare.com/articles/dataset/Appendix_B_A_table_of_feeding_behaviors_used_by_morphotypes_of_Herichthys_minckleyi_/3522695

  Dataset

• Appendix A. Summary of the ANOVA results demonstrating the effects of source tree (genotype) and source height on aphid survivorship, fecundity, and expected fitness.

  Holeski, L. M. (Creator), Kearsley, M. J. C. (Creator) & Whitham, T. G. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3532109, https://wiley.figshare.com/articles/dataset/Appendix_A_Summary_of_the_ANOVA_results_demonstrating_the_effects_of_source_tree_genotype_and_source_height_on_aphid_survivorship_fecundity_and_expected_fitness_/3532109

  Dataset

• Landscape genetic connectivity in a riparian foundation tree is jointly driven by climatic gradients and river networks

  Cushman, S. A. (Creator), Max, T. (Creator), Meneses, N. (Contributor), Evans, L. M. (Creator), Ferrier, S. (Creator), Honchak, B. (Creator), Whitham, T. G. (Creator) & Allan, G. J. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3296264, https://figshare.com/collections/Landscape_genetic_connectivity_in_a_riparian_foundation_tree_is_jointly_driven_by_climatic_gradients_and_river_networks/3296264

  Dataset

• Subtree-grafting python script

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19288391.v1, https://figshare.com/articles/software/Subtree-grafting_python_script/19288391/1

  Dataset

• Omnitrophota 2022

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Moser, D. P. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6010411, https://figshare.com/collections/Omnitrophota_2022/6010411

  Dataset

• Figure 15 in Geographic variation in host selection in the spider wasps Entypus unifasciatus (Say) and Tachypompilus ferrugineus (Say) (Hymenoptera: Pompilidae)

  Kurczewski, F. E. (Contributor), West, R. C. (Contributor), Kissane, K. C. (Contributor) & Cobb, N. S. (Contributor), Zenodo, Apr 24 2020

  DOI: 10.5281/zenodo.3779091, https://zenodo.org/record/3779091

  Dataset

• SEGA Plant Survey - Blue Chute

  Whipple, A. (Creator), UC Santa Barbara, 2018

  DOI: 10.5063/f18c9tdf, https://knb.ecoinformatics.org/view/doi:10.5063/F18C9TDF

  Dataset

• Figure 1 from: Belitz M, Hendrick L, Monfils M, Cuthrell D, Marshall C, Kawahara A, Cobb N, Zaspel J, Horton A, Huber S, Warren A, Forthaus G, Monfils A (2018) Aggregated occurrence records of the federally endangered Poweshiek skipperling (Oarisma poweshiek). Biodiversity Data Journal 6: e29081. https://doi.org/10.3897/BDJ.6.e29081

  Belitz, M. (Contributor), Hendrick, L. (Contributor), Monfils, M. (Contributor), Cuthrell, D. (Contributor), Marshall, C. (Contributor), Kawahara, A. (Contributor), Cobb, N. (Contributor), Zaspel, J. (Contributor), Horton, A. (Contributor), Huber, S. (Contributor), Warren, A. (Contributor), Forthaus, G. (Contributor) & Monfils, A. (Contributor), Zenodo, Oct 5 2018

  DOI: 10.3897/BDJ.6.e29081.figure1, https://zenodo.org/record/1445855

  Dataset

• Figures 1–6. Entypus unifasciatus. 1 in Geographic variation in host selection in the spider wasps Entypus unifasciatus (Say) and Tachypompilus ferrugineus (Say) (Hymenoptera: Pompilidae)

  Kurczewski, F. E. (Contributor), West, R. C. (Contributor), Kissane, K. C. (Contributor) & Cobb, N. S. (Contributor), Zenodo, Apr 24 2020

  DOI: 10.5281/zenodo.3779081, https://zenodo.org/record/3779081

  Dataset

• Omnitrophota MAGs

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Liu, L. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19918813.v1, https://figshare.com/articles/dataset/Omnitrophota_MAGs/19918813/1

  Dataset

• Figure 3 from: McCabe LM, Chesshire PR, Smith DR, Wolf A, Gibbs J, Griswold TL, Wright KW, Cobb NS (2020) Bee species checklist of the San Francisco Peaks, Arizona. Biodiversity Data Journal 8: e49285. https://doi.org/10.3897/BDJ.8.e49285

  McCabe, L. (Contributor), Chesshire, P. (Contributor), Smith, D. (Contributor), Wolf, A. (Contributor), Gibbs, J. (Contributor), Griswold, T. (Contributor), Wright, K. (Contributor) & Cobb, N. (Contributor), Zenodo, Apr 10 2020

  DOI: 10.3897/BDJ.8.e49285.figure3, https://zenodo.org/record/3747075

  Dataset

• Supplementary material 3 from: McCabe LM, Chesshire PR, Smith DR, Wolf A, Gibbs J, Griswold TL, Wright KW, Cobb NS (2020) Bee species checklist of the San Francisco Peaks, Arizona. Biodiversity Data Journal 8: e49285. https://doi.org/10.3897/BDJ.8.e49285

  McCabe, L. (Contributor), Chesshire, P. (Contributor), Smith, D. (Contributor), Wolf, A. (Contributor), Gibbs, J. (Contributor), Griswold, T. (Contributor), Wright, K. (Contributor) & Cobb, N. (Contributor), Zenodo, Apr 10 2020

  DOI: 10.3897/BDJ.8.e49285.suppl3, https://zenodo.org/record/3747087

  Dataset

• Taxon collision-checking script.

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Hua, Z. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.20365317.v1, https://figshare.com/articles/software/Taxon_collision-checking_script_/20365317/1

  Dataset

• Omnitrophota marker gene trees

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19918432, https://figshare.com/articles/dataset/Omnitrophota_marker_gene_trees/19918432

  Dataset

• Omnitrophota functional gene trees

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Liu, L. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19918438, https://figshare.com/articles/dataset/Omnitrophota_functional_gene_trees/19918438

  Dataset

• Figure 4 from: Beresic-Perrins RK, Govedich FR, Banister K, Bain BA, Rose D, Shuster SM (2017) Helobdella blinni sp. n. (Hirudinida, Glossiphoniidae) a new species inhabiting Montezuma Well, Arizona, USA. ZooKeys 661: 137-155. https://doi.org/10.3897/zookeys.661.9728

  Beresic-Perrins, R. K. (Contributor), Govedich, F. R. (Contributor), Banister, K. (Contributor), Bain, B. A. (Contributor), Rose, D. (Contributor) & Shuster, S. M. (Contributor), Zenodo, Mar 15 2017

  DOI: 10.3897/zookeys.661.9728.figure4, https://zenodo.org/record/983823

  Dataset

• SEGA Plant Survey - Little Colorado River (Upland Area)

  Whipple, A. (Creator), UC Santa Barbara, 2018

  DOI: 10.5063/f1c53j0b, https://knb.ecoinformatics.org/view/doi:10.5063/F1C53J0B

  Dataset

• Adaptive trait syndromes along multiple economic spectra define cold and warm adapted ecotypes in a widely distributed foundation tree species

  Blasini, D. (Creator), Koepke, D. (Creator), Grady, K. (Creator), Allan, G. (Creator), Gehring, C. (Creator), Cushman, S. A. (Creator), Whitham, T. (Creator) & Hultine, K. (Creator), DRYAD, Nov 16 2020

  DOI: 10.5061/dryad.gf1vhhmn9, https://datadryad.org/stash/dataset/doi:10.5061/dryad.gf1vhhmn9

  Dataset

• SEGA Plant Survey - Little Colorado River (Lowland Area)

  Whipple, A. (Creator), UC Santa Barbara, 2018

  DOI: 10.5063/f1gx48qb, https://knb.ecoinformatics.org/view/doi:10.5063/F1GX48QB

  Dataset

• AAI Rscript

  Seymour, C. (Creator), Palmer, M. (Creator), Becraft, E. D. (Creator), Stepanauskas, R. (Creator), Friel, A. D. (Creator), Schulz, F. (Creator), Woyke, T. (Creator), Eloe-Fadrosh, E. (Creator), Lai, D. (Creator), Jiao, J. (Creator), Hua, Z. (Creator), Lian, Z. (Creator), Chuvochina, M. (Creator), Finley, B. (Creator), Koch, B. J. (Creator), Hungate, B. A. (Creator) & Hedlund, B. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19288382.v1, https://figshare.com/articles/software/AAI_Rscript/19288382/1

  Dataset

• Figure 4 from: McCabe LM, Chesshire PR, Smith DR, Wolf A, Gibbs J, Griswold TL, Wright KW, Cobb NS (2020) Bee species checklist of the San Francisco Peaks, Arizona. Biodiversity Data Journal 8: e49285. https://doi.org/10.3897/BDJ.8.e49285

  McCabe, L. (Contributor), Chesshire, P. (Contributor), Smith, D. (Contributor), Wolf, A. (Contributor), Gibbs, J. (Contributor), Griswold, T. (Contributor), Wright, K. (Contributor) & Cobb, N. (Contributor), Zenodo, Apr 10 2020

  DOI: 10.3897/BDJ.8.e49285.figure4, https://zenodo.org/record/3747077

  Dataset

• Ectomycorrhizal (Dipterocarp) and arbuscular mycorrhizal (non-dipterocarp) tree

  Cowan, J. (Creator), Gehring, C. (Creator), Axelsson, E. P. (Creator), Ilstedt, U. (Creator), Kumar, S. V. (Creator) & Grady, K. (Creator), DRYAD, Oct 31 2022

  DOI: 10.5061/dryad.pk0p2ngrt, https://datadryad.org/stash/dataset/doi:10.5061/dryad.pk0p2ngrt

  Dataset