Biological Sciences

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• Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity

  Ma, X. (Creator), Wang, T. (Creator), Shi, Z. (Creator), Chiariello, N. R. (Creator), Docherty, K. (Creator), Field, C. B. (Creator), Gutknecht, J. (Creator), Gao, Q. (Creator), Gu, Y. (Creator), Guo, X. (Creator), Hungate, B. A. (Creator), Lei, J. (Creator), Niboyet, A. (Creator), Le Roux, X. (Creator), Yuan, M. (Creator), Yuan, T. (Creator), Zhou, J. (Creator) & Yang, Y. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6123277.v1, https://springernature.figshare.com/collections/Long-term_nitrogen_deposition_enhances_microbial_capacities_in_soil_carbon_stabilization_but_reduces_network_complexity/6123277/1

  Dataset

• FIGURE 3 in The Gyrinidae (Coleoptera) fauna of Thailand: Key to tribes and genera, with new records and keys to species of Dineutini and Gyrinini

  Suksai, B. (Contributor), Gustafson, G. T. (Contributor), Sites, R. W. (Contributor) & Sangpradub, N. (Contributor), Zenodo, Nov 22 2021

  DOI: 10.5281/zenodo.5723333, https://zenodo.org/record/5723333

  Dataset

• FIGURE 5 in The Gyrinidae (Coleoptera) fauna of Thailand: Key to tribes and genera, with new records and keys to species of Dineutini and Gyrinini

  Suksai, B. (Contributor), Gustafson, G. T. (Contributor), Sites, R. W. (Contributor) & Sangpradub, N. (Contributor), Zenodo, Nov 22 2021

  DOI: 10.5281/zenodo.5723337, https://zenodo.org/records/5723337

  Dataset

• Transcriptomic profiles of muscular dystrophy with myositis (mdm) in extensor digitorum longus, psoas, and soleus muscles from mice

  Hettige, P. (Creator), Tahir, U. (Creator), Nishikawa, K. C. (Creator) & Gage, M. J. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6204044, https://springernature.figshare.com/collections/Transcriptomic_profiles_of_muscular_dystrophy_with_myositis_mdm_in_extensor_digitorum_longus_psoas_and_soleus_muscles_from_mice/6204044

  Dataset

• Leptospira sanjuanensis sp. nov., a pathogenic species of the genus Leptospira isolated from soil in Puerto Rico

  Fernandes, L. G. V. (Creator), Stone, N. E. (Creator), Roe, C. C. (Creator), Goris, M. G. A. (Creator), van der Linden, H. (Contributor), Sahl, J. W. (Creator), Wagner, D. M. (Creator) & Nally, J. E. (Creator), Microbiology Society, 2022

  DOI: 10.6084/m9.figshare.20334444, https://microbiology.figshare.com/articles/dataset/Leptospira_sanjuanensis_sp_nov_a_pathogenic_species_of_the_genus_Leptospira_isolated_from_soil_in_Puerto_Rico/20334444

  Dataset

• Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity

  Ma, X. (Creator), Wang, T. (Creator), Shi, Z. (Creator), Chiariello, N. R. (Creator), Docherty, K. (Creator), Field, C. B. (Creator), Gutknecht, J. (Creator), Gao, Q. (Creator), Gu, Y. (Creator), Guo, X. (Creator), Hungate, B. A. (Creator), Lei, J. (Creator), Niboyet, A. (Creator), Le Roux, X. (Creator), Yuan, M. (Creator), Yuan, T. (Creator), Zhou, J. (Creator) & Yang, Y. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6123277, https://springernature.figshare.com/collections/Long-term_nitrogen_deposition_enhances_microbial_capacities_in_soil_carbon_stabilization_but_reduces_network_complexity/6123277

  Dataset

• Data from: Vocal divergence is concordant with genomic evidence for strong reproductive isolation in grasshopper mice (Onychomys)

  Campbell, P. (Contributor), Arévalo, L. (Contributor), Martin, H. (Contributor), Chen, C. (Contributor), Sun, S. (Contributor), Rowe, A. H. (Contributor), Webster, M. S. (Contributor), Searle, J. B. (Contributor) & Pasch, B. (Contributor), Zenodo, Sep 25 2020

  DOI: 10.5061/dryad.j2k683s, https://zenodo.org/records/4069090

  Dataset

• Additional file 6 of Comparative analysis of the transcriptomes of EDL, psoas, and soleus muscles from mice

  Hettige, P. (Contributor), Tahir, U. (Contributor), Nishikawa, K. C. (Contributor) & Gage, M. J. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.13265901, https://springernature.figshare.com/articles/dataset/Additional_file_6_of_Comparative_analysis_of_the_transcriptomes_of_EDL_psoas_and_soleus_muscles_from_mice/13265901

  Dataset

• Leptospira in river and soil in a highly endemic area of Ecuador

  Miller, E. (Creator), Barragan, V. (Creator), Chiriboga, J. (Creator), Weddell, C. (Creator), Luna, L. (Creator), Jiménez, D. J. (Creator), Aleman, J. (Creator), Mihaljevic, J. R. (Creator), Olivas, S. (Contributor), Marks, J. (Creator), Izurieta, R. (Creator), Nieto, N. (Creator), Keim, P. (Creator), Trueba, G. (Creator), Caporaso, J. G. (Contributor) & Pearson, T. (Contributor), figshare Academic Research System, 2021

  DOI: 10.6084/m9.figshare.c.5261254.v1, https://springernature.figshare.com/collections/Leptospira_in_river_and_soil_in_a_highly_endemic_area_of_Ecuador/5261254/1

  Dataset

• Additional file 3 of The bacterial communities of Alaskan mosses and their contributions to N2-fixation

  Holland-Moritz, H. (Creator), Stuart, J. E. M. (Creator), Lewis, L. R. (Creator), Miller, S. N. (Creator), Mack, M. C. (Creator), Ponciano, J. M. (Creator), McDaniel, S. F. (Creator) & Fierer, N. (Creator), figshare Academic Research System, 2021

  DOI: 10.6084/m9.figshare.14100703.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_The_bacterial_communities_of_Alaskan_mosses_and_their_contributions_to_N2-fixation/14100703/1

  Dataset

• Additional file 6 of The bacterial communities of Alaskan mosses and their contributions to N2-fixation

  Holland-Moritz, H. (Creator), Stuart, J. E. M. (Creator), Lewis, L. R. (Creator), Miller, S. N. (Creator), Mack, M. C. (Creator), Ponciano, J. M. (Creator), McDaniel, S. F. (Creator) & Fierer, N. (Creator), figshare, 2021

  DOI: 10.6084/m9.figshare.14100715, https://springernature.figshare.com/articles/dataset/Additional_file_6_of_The_bacterial_communities_of_Alaskan_mosses_and_their_contributions_to_N2-fixation/14100715

  Dataset

• Data from: Large effect quantitative trait loci for salicinoid phenolic glycosides in Populus: implications for gene discovery

  Woolbright, S. A. (Contributor), Rehill, B. J. (Contributor), Lindroth, R. L. (Contributor), DiFazio, S. P. (Contributor), Martinsen, G. D. (Contributor), Zinkgraf, M. S. (Contributor), Allan, G. J. (Contributor), Keim, P. (Contributor) & Whitham, T. G. (Contributor), Zenodo, Jan 25 2019

  DOI: 10.5061/dryad.8h67t, https://zenodo.org/records/4962391

  Dataset

• Additional file 3 of Comparative analysis of the transcriptomes of EDL, psoas, and soleus muscles from mice

  Hettige, P. (Contributor), Tahir, U. (Contributor), Nishikawa, K. C. (Contributor) & Gage, M. J. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.13265889, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Comparative_analysis_of_the_transcriptomes_of_EDL_psoas_and_soleus_muscles_from_mice/13265889

  Dataset

• Supplementary material from "Mechanisms underlying interaction frequencies and robustness in a novel seed dispersal network: lessons for restoration"

  Vizentin-Bugoni, J. (Creator), Sperry, J. H. (Creator), Kelley, J. P. (Creator), Foster, J. T. (Creator), Drake, D. R. (Creator), Case, S. B. (Creator), Gleditsch, J. M. (Creator), Hruska, A. M. (Creator), Wilcox, R. C. (Creator) & Tarwater, C. E. (Creator), The Royal Society, 2022

  DOI: 10.6084/m9.figshare.c.6168270, https://rs.figshare.com/collections/Supplementary_material_from_Mechanisms_underlying_interaction_frequencies_and_robustness_in_a_novel_seed_dispersal_network_lessons_for_restoration_/6168270

  Dataset

• Residual force enhancement is reduced in permeabilized fiber bundles from mdm muscles

  Nishikawa, K. (Creator), Mishra, D. (Creator) & Nishikawa, K. C. (Creator), DRYAD, Apr 12 2022

  DOI: 10.5061/dryad.m37pvmd47, https://datadryad.org/stash/dataset/doi:10.5061/dryad.m37pvmd47

  Dataset

• Sperm limitation produces male biased family sex ratios

  Shuster, S. (Creator), Holditch, Z. (Creator), Ochoa, K. (Creator), Allred, S. (Creator) & Baranowski, J. (Creator), DRYAD, May 6 2022

  DOI: 10.5061/dryad.mw6m905zw, https://datadryad.org/stash/dataset/doi:10.5061/dryad.mw6m905zw

  Dataset

• Crystal structure of the multidrug efflux transporter BpeB from Burkholderia pseudomallei

  Kato, T. (Contributor), Okada, U. (Contributor), Hung, L.-W. (Contributor), Yamashita, E. (Contributor), Kim, H.-B. (Contributor), Kim, C.-Y. (Contributor), Terwilliger, T. C. (Contributor), Schweizer, H. P. (Contributor) & Murakami, S. (Contributor), Protein Data Bank (PDB), Jul 19 2023

  DOI: 10.2210/pdb7WLS/pdb, https://www.wwpdb.org/pdb?id=pdb_00007wls

  Dataset

• Supplement 1. Macroinvertebrate community matrix data.

  LeRoy, C. J. (Creator), Whitham, T. G. (Creator), Keim, P. (Creator) & Marks, J. C. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.3525674.v1, https://wiley.figshare.com/articles/dataset/Supplement_1_Macroinvertebrate_community_matrix_data_/3525674/1

  Dataset

• Appendix A. Figures showing densities for binned SIP fractions and total DNA abundance, bacterial 16S rRNA gene abundance, and fungal ITS abundance in binned density fractions.

  Blazewicz, S. J. (Creator), Schwartz, E. (Creator) & Firestone, M. K. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.3559119.v1, https://wiley.figshare.com/articles/dataset/Appendix_A_Figures_showing_densities_for_binned_SIP_fractions_and_total_DNA_abundance_bacterial_16S_rRNA_gene_abundance_and_fungal_ITS_abundance_in_binned_density_fractions_/3559119/1

  Dataset

• Recovery of arctic tundra from thermal erosion disturbance is constrained by nutrient accumulation: a modeling analysis

  Pearce, A. R. (Contributor), Rastetter, E. B. (Contributor), Kwiatkowski, B. L. (Contributor), Bowden, W. B. (Contributor), Mack, M. C. (Contributor) & Jiang, Y. (Contributor), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3296891.v1, https://figshare.com/collections/Recovery_of_arctic_tundra_from_thermal_erosion_disturbance_is_constrained_by_nutrient_accumulation_a_modeling_analysis/3296891/1

  Dataset

• Home-field advantage? evidence of local adaptation among plants, soil, and arbuscular mycorrhizal fungi through meta-analysis

  Rúa, M. A. (Contributor), Antoninka, A. (Creator), Antunes, P. M. (Creator), Chaudhary, V. B. (Contributor), Gehring, C. (Creator), Lamit, L. J. (Creator), Piculell, B. J. (Creator), Bever, J. D. (Creator), Zabinski, C. (Creator), Meadow, J. F. (Creator), Lajeunesse, M. J. (Creator), Milligan, B. G. (Creator), Karst, J. (Creator) & Hoeksema, J. D. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3600869.v1, https://figshare.com/collections/Home-field_advantage_evidence_of_local_adaptation_among_plants_soil_and_arbuscular_mycorrhizal_fungi_through_meta-analysis/3600869/1

  Dataset

• Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia

  Williamson, C. H. D. (Creator), Sahl, J. W. (Creator), Smith, T. J. (Creator), Xie, G. (Creator), Foley, B. T. (Creator), Smith, L. A. (Creator), Fernández, R. A. (Contributor), Lindström, M. (Contributor), Korkeala, H. (Creator), Keim, P. (Creator), Foster, J. (Creator) & Hill, K. (Creator), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3630344.v1, https://figshare.com/collections/Comparative_genomic_analyses_reveal_broad_diversity_in_botulinum-toxin-producing_Clostridia/3630344/1

  Dataset

• Antibiotic-resistant Escherichia coli from retail poultry meat with different antibiotic use claims

  Davis, G. S. (Creator), Waits, K. (Creator), Nordstrom, L. (Creator), Grande, H. (Creator), Weaver, B. (Creator), Papp, K. (Creator), Horwinski, J. (Creator), Koch, B. (Creator), Hungate, B. A. (Creator), Liu, C. M. (Creator) & Price, L. B. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.c.4289861.v1, https://figshare.com/collections/Antibiotic-resistant_Escherichia_coli_from_retail_poultry_meat_with_different_antibiotic_use_claims/4289861/1

  Dataset

• Population genetics of Orientia tsutsugamushi

  Fleshman, A. (Creator), Mullins, K. (Creator), Sahl, J. (Contributor), Hepp, C. (Contributor), Nieto, N. (Contributor), Wiggins, K. (Creator), Hornstra, H. (Creator), Kelly, D. (Contributor), Chan, T.-C. (Creator), Phetsouvanh, R. (Creator), Dittrich, S. (Creator), Panyanivong, P. (Creator), Paris, D. (Contributor), Newton, P. (Creator), Richards, A. (Contributor) & Pearson, T. (Creator), figshare Academic Research System, 2018

  DOI: 10.6084/m9.figshare.5995456.v1, https://figshare.com/articles/dataset/Population_genetics_of_Orientia_tsutsugamushi/5995456/1

  Dataset

• FIGURE 1 in LepNet: The Lepidoptera of North America Network

  Seltmann, K. C. (Contributor), Cobb, N. S. (Contributor), Gall, L. F. (Contributor), Bartlett, C. R. (Contributor), Basham, M. A. (Contributor), Betancourt, I. (Contributor), Bills, C. (Contributor), Brandt, B. (Contributor), Brown, R. L. (Contributor), Bundy, C. (Contributor), Caterino, M. S. (Contributor), Chapman, C. (Contributor), Cognato, A. (Contributor), Colby, J. (Contributor), Cook, S. P. (Contributor), Daly, K. M. (Contributor), Dyer, L. A. (Contributor), Franz, N. M. (Contributor), Grinter, C. C. (Contributor), Harp, C. E. (Contributor), Hawkins, R. L. (Contributor), Heydon, S. L. (Contributor), Hill, G. M. (Contributor), Huber, S. (Contributor), Johnson, N. (Contributor), Kawahara, A. Y. (Contributor), Kimsey, L. S. (Contributor), Kondratieff, B. C. (Contributor), Krell, F.-T. (Contributor), Leblanc, L. (Contributor) & Lee, S. (Contributor), Zenodo, Dec 31 2017

  DOI: 10.5281/zenodo.437983, https://zenodo.org/record/437983

  Dataset