Omnitrophota marker gene trees

  • Cale O. Seymour (Creator)
  • Marike Palmer (Creator)
  • Eric D. Becraft (Creator)
  • Ramunas Stepanauskas (Creator)
  • Ariel D. Friel (Creator)
  • Frederik Schulz (Creator)
  • Tanja Woyke (Creator)
  • Emiley A. Eloe-Fadrosh (Creator)
  • Dengxun Lai (Creator)
  • Jian Yu Jiao (Creator)
  • Zheng Shuang Hua (Creator)
  • Zheng Han Lian (Creator)
  • Maria Chuvochina (Creator)
  • Brianna K. Finley (Creator)
  • Benjamin J. Koch (Creator)
  • Bruce A. Hungate (Creator)
  • Brian P. Hedlund (Creator)

Dataset

Description

Phylogenetic trees associated with Omnitrophota marker genes. All trees are newick format. rooted-16-tree.nwk : Rooted 16S rRNA gene tree. bac120-alignment-hmq-trimal.faa.treefile: Bac120 marker alignment of high and medium quality species cluster representatives. bcg110-alignment-hmq-trimal.faa.treefile: "Bacterial core genome" bcg110 marker alignment of high and medium quality species cluster representatives. ubcg-alignment-hmq-trimal.faa.treefile: "Up-to-date bacterial core genome" ubcg marker alignment of high and medium quality species cluster representatives. uni56-alignment-hmq-trimal.faa.treefile: "universal" 56 marker alignment of high and medium quality species cluster representatives.
Date made available2022
Publisherfigshare

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